Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1970g00027 ATGGAAGACGAAGGTGCTGGGTGGCCGATACCTACTTCAATTTTTCTCATCTTGTTTTTTCTCTTTGTCTCTAAATATGTACTAAAGAGACAAGCCAAGCATAGAAACCTCCCACCTAGCCCACCTGCTTTACCAGTTATAGGTCATCTTCATCTGATAAAAGAACCTCTACACAGAAGTCTGCATAATCTAACAGAGAAATATGGCCACATATTTGTTCTCCACCTTGGAACCCGAAATGTCCTCGTTGTGTCATCACCTTCTGCTGTAGAAGAATGCCTTTCCAAGAATGATATCACTTTTGCAAACCGTCCTCACACCCTTGCTGGGAAACACCTCAGTTACAACCATAAATCAGTGGGATTCGCTTCCTATGGCGATCATTGGCGCAACCTTCGGCGTCTAATAACACTTGAGCTGTTATCTACCAACCGTCTGGCCATGCTTGCAAGAATTCGAGAGGAAGAGATTCAACTGTTGGTGAAGCAACTACATGAAGAGTGCAAAGGACACGTGTCAAAGGTGGTAGACATAAGGTCTAGACTGTTGGAGCTTTCTTTCAACATCATGCTAAGGATGATCTCTGGGAAAAGGTACTATGGGAAGGATGCGGTTGCTGAAGAAGGGAGAGAGTTCCAGTTTCTTATGAAAGAGTTCGTAGAGCTGCAAGGAAGTGGTAATTTGAATGACTTCTTTCCAATACTGCAATGGATTGATTTTCAAGGTTTGGAAAAGAGGATGGTCAAGTTGATGAACAAGGTCGATAGCTTCTTTCAGAAACTCCTTGATGAGCACCGGAGAAACAGGAACATCAGTGCCGGAAAAGTCCGAAGGAACATGTCGACGCTGATTGATACTATGTTGGATCTCCAAGACAAGGAACCAGAATTCTACACTAACGAAACTGTCAAAGGCGTTATTATGGCAATGCTTGTAGCTGGGTCTGAAACTTCGGCTACTACATTGGAATGGGCACTGTCACTTCTCCTCAACCATCCAGAAGCAATGAATAAGACTATTGTTGAGATAGACTCTTACGTGGGGCAAGATCACCTGTTGAATGAACTAGATACTCCCAAACTTAAATACTTGCAAAATGTAATTACCGAGACACTTCGTCTCTACCCTGTGGCTCCTCTCTTGGTACCCCACAAGTCCTCTAAAGATTGCAATGTTTGTGGTTTTGATGTACCAGCAGGGACAATGCTCCTTGTTAATCTATGGACCCTGCATAGGAACGCTAAGTGGTGGGCAGAACCAACAAGGTTTGAGCCAGAGAGATTTGAGGGAGGGCAAGGTTGTGATGTACTTTACAATATGATTCCATTTGGTATTGGAAGGAGAGCTTGCCCTGGAGCTGCTTTGGCAAAACGTGTTATGGGACATGCATTAGGAGCCTTGATTCAGTGTTTTGAGTGGGAAAGAATTGGGGATCAAGAAATCAACATGATGGAGGGTGTAGGGCTTACCATGCCCAAAATTGAGCCTTTGGTGGCATTATGCAGGCCACGCCAAAGCATGATCAAGGTTATGTCGAATATATAA 1545 0.4388 MEDEGAGWPIPTSIFLILFFLFVSKYVLKRQAKHRNLPPSPPALPVIGHLHLIKEPLHRSLHNLTEKYGHIFVLHLGTRNVLVVSSPSAVEECLSKNDITFANRPHTLAGKHLSYNHKSVGFASYGDHWRNLRRLITLELLSTNRLAMLARIREEEIQLLVKQLHEECKGHVSKVVDIRSRLLELSFNIMLRMISGKRYYGKDAVAEEGREFQFLMKEFVELQGSGNLNDFFPILQWIDFQGLEKRMVKLMNKVDSFFQKLLDEHRRNRNISAGKVRRNMSTLIDTMLDLQDKEPEFYTNETVKGVIMAMLVAGSETSATTLEWALSLLLNHPEAMNKTIVEIDSYVGQDHLLNELDTPKLKYLQNVITETLRLYPVAPLLVPHKSSKDCNVCGFDVPAGTMLLVNLWTLHRNAKWWAEPTRFEPERFEGGQGCDVLYNMIPFGIGRRACPGAALAKRVMGHALGALIQCFEWERIGDQEINMMEGVGLTMPKIEPLVALCRPRQSMIKVMSNI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1970g00027 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Gabi1970g00027 514 Gene3D Cytochrome P450 27 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 CDD CYP81 69 497 - -
Gabi1970g00027 514 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PANTHER CYTOCHROME P450 82C3-RELATED 15 506 - -
Gabi1970g00027 514 Pfam Cytochrome P450 38 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 SUPERFAMILY Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1970g00027 514 FunFam Cytochrome P450 family protein 28 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1970g00027 Gabi-Chr1970 275107 278536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1970g00027 12 512 Cytochrome P450 AT4G37370 45.562 4.65e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1970g00027 - - gmx:100794610 753.051