Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1968g00005 ATGTCTCCTTATTCTCTCTCTTTGTTGGTCTCTGCGAACCCCATTGCGCAGAGACTTTCTTTGTTAACTCCTCCTTCAACCCTTTGTGTTCCTAACCACATAACCATAGCCAAGTTCTCGCATTTTCACTCCTTTTCTTCTTCACCACTCAGTCTCACTATGAATGGACTTTCATGCCCATCTTCTTCTTTGCTATTCAGTGCTCCAAAGTCTTTTTCTTTTCACATTTCAACTCCAAAAATTGTATCTTTCAGGGTCTTTGCTACTTCTCTACCTGAGGCTAAAAGTGATGACCCAATCAAACCAAGTGGTTTGTTTCACACTATGCAGCTTGGAGCCATGTTTGCAACTTGGTACCTCTTGAATATTTACTTCAACATTTATAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTGGGCTTTACTACGTTGATGATTAATTTGATGTGGACTATGCATCTCCACCCTAGACCAAAAATCAGTGGTTCACAGCTTGCATCAATCCTTCCACTGGCTGTGGCTCATACAATGGGGAACCTGTTGACCAACATTAGTCTTGGCAAGGTTTCTGTGTCTTTCACTCACACAATCAAATCTATGGAGCCCTTTTTCACTGTTGTTCTTTCTTCCCTTTTTCTGGGTGAGAGGCCCACTTTATGGGTGGTTTCTTCACTTGTACCAATTGTAGGAGGAGTTGCACTAGCATCAGTGACTGAAGTCTCTTTCAATTGGATTGGGTTCATTACTGCTATGGCATCTAACCTTACTAATCAATCACGGAATGTTTTGAGCAAAAAACTAATGGCCAATGAAGAGGAAACTATGGACAATATCAATATCTACTCAGTTATAACCATCATTTCCTTTATCATGTTGGTCCCATGTGCTATATTTTTGGAGGGTGTCAAGTTTACTCCTTCATACCTGCAATCTGCTGCAAGCCAAGGATTGAATCTTAGAGAGCTATGTGTGAGATCAGTTTTGGCTGCATTCTGCTTCCATGCATACCAACAGGTTTCTTATGGGATATTACAGATGGTATCACCTGTGACTCATTCAGTTGGAAATTGTGTGAAGCGTGTGATTGTCATAGTCTCTTCAGTTATCTTTTTCCAAACTGCTGTCTCACCAGTTAACACACTTGGAACTGCTGTTGCACTTGTTGGAGTTTTCTTGTATTCAAGGGCAAAGAGGATAAAGCCAATGCCAAAGACAAAGGCAGCATAA 1251 0.4069 MSPYSLSLLVSANPIAQRLSLLTPPSTLCVPNHITIAKFSHFHSFSSSPLSLTMNGLSCPSSSLLFSAPKSFSFHISTPKIVSFRVFATSLPEAKSDDPIKPSGLFHTMQLGAMFATWYLLNIYFNIYNKQVLKVYPFPATVTAFQLGFTTLMINLMWTMHLHPRPKISGSQLASILPLAVAHTMGNLLTNISLGKVSVSFTHTIKSMEPFFTVVLSSLFLGERPTLWVVSSLVPIVGGVALASVTEVSFNWIGFITAMASNLTNQSRNVLSKKLMANEEETMDNINIYSVITIISFIMLVPCAIFLEGVKFTPSYLQSAASQGLNLRELCVRSVLAAFCFHAYQQVSYGILQMVSPVTHSVGNCVKRVIVIVSSVIFFQTAVSPVNTLGTAVALVGVFLYSRAKRIKPMPKTKAA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1968g00005 416 Pfam Triose-phosphate Transporter family 109 402 IPR004853 -
Gabi1968g00005 416 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 110 412 IPR004696 GO:0016020|GO:0022857|GO:0055085
Gabi1968g00005 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 156 245 - -
Gabi1968g00005 416 PANTHER SOLUTE CARRIER FAMILY 35 111 406 - -
Gabi1968g00005 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 326 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1968g00005 Gabi-Chr1968 160658 167089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1968g00005 22 413 Antiporters AT5G33320 56.328 1.61e-147 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1968g00005 K15283 - gmx:100819280 598.201