Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1964g00036 ATGGGTAAGGGAACGGGGAGTTTCGGTAAGAGGAGGAACAAGACTCACACACTCTGTGTGAGGTGTGGCCGCCGCAGTTTCCACCTCCAGAAGAGTCGCTGCTCCGCCTGCGCTTATCCGGCGGCTCGCACGAGGAAATATAACTGGAGTGTCAAGGCCATTAGGAGAAAGACCACTGGGACTGGTAGGATGAGGTACTTGCGTCACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGAAGGTACCGAAGCTGCACCCAGGAAGAAGGGAGGAGCTGCCACTGCCTAA 288 0.566 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARTRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTEAAPRKKGGAATA 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1964g00036 95 FunFam Ribosomal protein L37 1 88 - -
Gabi1964g00036 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Gabi1964g00036 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Gabi1964g00036 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Gabi1964g00036 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 93 - -
Gabi1964g00036 95 MobiDBLite consensus disorder prediction 71 95 - -
Gabi1964g00036 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1964g00036 Gabi-Chr1964 248923 249703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1964g00036 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 87.368 3.81e-57 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1964g00036 K02922 - qsa:O6P43_018148 194.897