Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1964g00029 ATGGAAACTTTGATATGGCCCAAGATCAGCTTGCTGGTTCTTGTGTTGTGCATATTGGTTTCTTTCGATAACCACAAACACACTAACAACACCAACACAACCATTTCCGTTCCGTTAGTCTCTTTATCCGTCAAGAACGAGAACTATGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACTCACTCCTTGAATATGATTTCTACCGCGATTCCTGCCCCCAGGCAGAGCGCATTGTTCGCACAACAACTCACCATCTCTACCAAGCCACACCCAATTTGGTTCCTGCTATCATTCGTCTTGCTTTCCATGATTGCTTTATTCAGGGATGTGATGCTTCTGTTTTGTTAGATGATGATGATTTCATTGACTCAGAGAAGGAGGCTCCTCCCAATGGAAGTCTCAGAGGTTTTGATGTAATCGAGATCATCAAATCCAAACTTGAAGAAGCATGCCCTGGGGTTGTTTCTTGTGCTGATATTCTTGTATTGGCAGCAAGAGACTCCGTGGTTCTGGCTGGTGGTCCATTCTATCCGTTACATACAGGAAGGAGAGATGGTTCTAACTCCTTCGCTGACATTGCAACATACGAGCTTCCTTCACCCTATGGTGATTTATCACAAACCCTTGCTTCCTTCAAAACAAGGGGGTTTGATGAAAGAGAGATGGTCACTCTCCTAGGTGCCCATAGCATTGGTGTAATCCACTGCAAATTCTTCCAAGACCGCCTCTATAACTTCAATGGAACTAATGAACCTGACCCCACTATAGATATTGAATTTCTAAACCTACTAAGATCAAGATGCAATTACTCAAATGCATCTTCCTCTTCAGTATCAGGATACAAATCCCATGGCTCACCTTCATCACAAGCATTTAACGCAACTCCGCTTAAAGGCTTACCTTCTTCCTTAGTTGAAGAACCTGGAATGGCTATGGAGTTTGAGCAACATGGATCAGATTTTGGGACGTTATACTACCGCAGCCTATTGCAAAGTAGAGGAATCCTCTATGCTGATCAGCAACTAATGGAAGGGGAAATAACCAAGAATTGGGTTGAAGCATATGCATTCAATCCTACTTTGTTCCATCAAGATTTTGCCCTGGCAATGATGAAACTCTCAGATATCCGGGTCTTGACCTTGCCTATGGGACAGATTCGGCTAAATTGTTCAAAGGTTGCGTGA 1206 0.4287 METLIWPKISLLVLVLCILVSFDNHKHTNNTNTTISVPLVSLSVKNENYDSSSSSSSSSSSSSSSSHSLLEYDFYRDSCPQAERIVRTTTHHLYQATPNLVPAIIRLAFHDCFIQGCDASVLLDDDDFIDSEKEAPPNGSLRGFDVIEIIKSKLEEACPGVVSCADILVLAARDSVVLAGGPFYPLHTGRRDGSNSFADIATYELPSPYGDLSQTLASFKTRGFDEREMVTLLGAHSIGVIHCKFFQDRLYNFNGTNEPDPTIDIEFLNLLRSRCNYSNASSSSVSGYKSHGSPSSQAFNATPLKGLPSSLVEEPGMAMEFEQHGSDFGTLYYRSLLQSRGILYADQQLMEGEITKNWVEAYAFNPTLFHQDFALAMMKLSDIRVLTLPMGQIRLNCSKVA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1964g00029 401 SUPERFAMILY Heme-dependent peroxidases 70 400 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Haem peroxidase superfamily signature 180 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Haem peroxidase superfamily signature 162 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Haem peroxidase superfamily signature 101 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 ProSitePatterns Peroxidases proximal heme-ligand signature. 228 238 IPR019793 -
Gabi1964g00029 401 Pfam Peroxidase 86 363 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 Gene3D - 70 210 - -
Gabi1964g00029 401 PRINTS Plant peroxidase signature 103 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Plant peroxidase signature 161 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Plant peroxidase signature 375 388 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Plant peroxidase signature 79 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Plant peroxidase signature 180 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Plant peroxidase signature 329 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Plant peroxidase signature 227 239 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 PRINTS Plant peroxidase signature 142 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 ProSitePatterns Peroxidases active site signature. 101 112 IPR019794 GO:0004601
Gabi1964g00029 401 ProSiteProfiles Plant heme peroxidase family profile. 69 401 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1964g00029 401 CDD secretory_peroxidase 70 400 IPR033905 GO:0004601|GO:0042744
Gabi1964g00029 401 FunFam Peroxidase 73 213 - -
Gabi1964g00029 401 Gene3D Peroxidase, domain 2 211 380 - -
Gabi1964g00029 401 PANTHER PEROXIDASE 25-RELATED 20 387 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1964g00029 Gabi-Chr1964 238093 240508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1964g00029 67 400 Peroxidase AT4G33870 51.190 5.86e-124 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1964g00029 K00430 - qsa:O6P43_027772 436.802