Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1964g00018 ATGCCGAAGAACATTCAGAAATCCCTTCAGAACTACCTCTCCAAGATCAAAAGTCCTAGCTCACCAATCCAATTACCCTCTAAGAAATGGATTCTCTCAGGTTGCACGCATCCCAGAACCCCTTCTTTTGCCTTAGACGACAACAAAAATGGACCTCATGACGTCAGCAACGACAACGACAACAACAACAACGTTAACAATAACAAAAACGATGAAGCCACGTTAGCGGACATCGATCGTTTCCTCTTTGAGAATTTCAAGTCTTTATACCTTGAAGACAATGAAGAAACCGATCATAACACCAAAAGGGTCTCTCAAGAAGAACATGATCAAACAAGCCATGATGAAACAACACCACCGGATCTACGTGGTTCCAACCGGTTCTTCTTGACACGTGGCTTCTCGGATGAAGGATCGAGTTCAAACTCAAACTTGAATGATTCTTCATCTTCGAATTTTCATGCAGAGGAAGGTGTGAAACAGAGGATTCCCAATAACTGCGTGGTGGTGTTGGCGAGCTCGCCGAGCCCCTATGAGGATTTTCGGCGATCAATGGAGGGAATGGTAGAAGCAAGGTTGAGGAACAATGAAAGGGTGGATTGGGATTTCATGGAGGAGCTTTTGTTTTGTTATATAAACATGAATGAGAAGAAGTCTTACAAGTTCATACTCAGTGCTTTTGTCGACTTGATCACCGTCATGCGGCGGCGTTCGGAGAAATCTCCGGCGAAGAATGCTCCGGCGAAGGTGAGGCCGCCACGGAGCGTTCGGACTGTTAGGATTGGTAGGGAGGTGAGGAAGAAGACTAAAGAAGTAACGTTGCGATTTGGGTCGCCGTAA 840 0.4571 MPKNIQKSLQNYLSKIKSPSSPIQLPSKKWILSGCTHPRTPSFALDDNKNGPHDVSNDNDNNNNVNNNKNDEATLADIDRFLFENFKSLYLEDNEETDHNTKRVSQEEHDQTSHDETTPPDLRGSNRFFLTRGFSDEGSSSNSNLNDSSSSNFHAEEGVKQRIPNNCVVVLASSPSPYEDFRRSMEGMVEARLRNNERVDWDFMEELLFCYINMNEKKSYKFILSAFVDLITVMRRRSEKSPAKNAPAKVRPPRSVRTVRIGREVRKKTKEVTLRFGSP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1964g00018 279 Pfam Transcriptional repressor, ovate 174 232 IPR006458 -
Gabi1964g00018 279 MobiDBLite consensus disorder prediction 55 70 - -
Gabi1964g00018 279 MobiDBLite consensus disorder prediction 94 121 - -
Gabi1964g00018 279 NCBIfam uncharacterized plant-specific domain TIGR01568 168 233 IPR006458 -
Gabi1964g00018 279 MobiDBLite consensus disorder prediction 94 158 - -
Gabi1964g00018 279 MobiDBLite consensus disorder prediction 41 70 - -
Gabi1964g00018 279 ProSiteProfiles OVATE domain profile. 170 233 IPR006458 -
Gabi1964g00018 279 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 72 233 IPR038933 GO:0045892
Gabi1964g00018 279 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1964g00018 Gabi-Chr1964 135696 136535 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi1964g00018 Ovate 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1964g00018 - - lja:Lj0g3v0139619.1 286.574