LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi1964g00014	ATGATTCTAAATGGTTGCATCGTATCCCAAGGGCGTGCTCCTGTGAACATTTGGCCATGCAACGCTTCTCAGGTGGCTGCTAAGGTTGCTCTCTCAAACATCCGGAGTTCTTGGGGATGCAGTTTGCAATGTAAATCCTGGTCGCCAAGAGGAATGACATTCTCAAACATGTCCGCTGCATCAAGCCTACTTTTAAGTGGGGGTCAAAATCTTATATTTCGTACAATCCCTGTGTTACCCAGGTTGCGCAGGTCTTATATGGCCCCTCGAGCTTCGAAGGATGTCCCATCCAGCTTCCGTTATCCCCCAATGATGAAAAAACCAAGATGGTGGTGGAGAACGTTAGCATGCATCCCTTACCTCATGCCTCTCCATGAGACATGGATGTATGCTGAGACAGCATATAATCTTCACCCATTTTTCGAAATCTTTGAATTCTATACATACCCTTTTCTTATGGCAATTGGGAGGCTTCCTAGCTGGTTCCTCATGGCATACTTTTTTGTTGCGTATCTTGGAATTGTGAGGAAAAAAGAATGGCCTCATTTCTTCAGGTTTCATGTTGTGATGGGAATGTTATTGGAGATTGCCCTGCAGGTTATAGGGACTGTGAGCCGTTGGATGCCACTATCACTCTACTGGGGTAAACTGGGAATGCATTTCTGGACTGCTGTAGCATTTGGTTATCTTTTTACTGTCTTGGAGTGCATAAGGTGTGCTCTTGTGGGTATGTATGCTGATGTCCCTTTTGTCTGTGACGCAGCATATATCCAAATACCATATGATTAA	789	0.4474	MILNGCIVSQGRAPVNIWPCNASQVAAKVALSNIRSSWGCSLQCKSWSPRGMTFSNMSAASSLLLSGGQNLIFRTIPVLPRLRRSYMAPRASKDVPSSFRYPPMMKKPRWWWRTLACIPYLMPLHETWMYAETAYNLHPFFEIFEFYTYPFLMAIGRLPSWFLMAYFFVAYLGIVRKKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAVAFGYLFTVLECIRCALVGMYADVPFVCDAAYIQIPYD	262

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi1964g00014	262	Pfam	Chloroplast import apparatus Tic20-like	83	255	IPR005691	-
	Gabi1964g00014	262	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	21	262	IPR005691	-
	Gabi1964g00014	262	NCBIfam	Tic20 family chloroplast protein importer	21	262	IPR005691	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi1964g00014	Gabi-Chr1964	109924	111683	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi1964g00014	13	262	Chloroplast and Mitochondria Gene Families	AT4G03320	36.981	1.74e-51	168

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi1964g00014	-		-	gmx:100818669	445.662