Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1956g00007 ATGAATCATTCCCAAATAACAACTATTGAAGATATCGACACGAGTGGGATTTTAGTATGTTATGATGACGTTGTTGATTTGGAGAAAGATGGTGATGAGTTTATTGACAATGATCATTGTGAAATTATGGAAAACGAAGATGGTGATGAGTTTATTGACAATGATCTTTGTGAAATTATGGAAAACGAAGATGAGGATCATATGCAAGGTAATGTACATGAAATTATGGGAGATGATGACAGTAAATTCAGCGAGACCAGCTTTTTATGTAGAGTCTTTGGGACATCAGAAGAAGCTTATGCTTTTTATAATGATTATGCAAAAGGTAAGGGCTTCGAAATACGTAAGCAATTCTTTAACAAGATTGCAAAAACACAACAAATATATAGGTGGAGATATGTGTGTTCAAAAGAAGGCATCAAAAGAGTAAATGATAACGCAATTAAAAGACGAAGGGATACAAGGACCAATTGTTTGGCGATGTTACAAATAAAGTTGGTGGATGGAGTATGGAAAGTGGAGAAGTTCAATGATACACACAATCATCCATTGATTAACACTCCAGCAAAGGGGAAAAAGTTTCCTTCTCAAAATGAACTACGACGCTCAAATGTTACTAAATCTCTTGTTTCTATGCTTTATGAGGAGGGTTTAACTTCTTCAAAAATCTCAAAGGTTGTGAATGCTATGGACAAAGATGTTAATATTACTCCAGTTCAAATCACCACTATTATATCAAGCCAGCGAAAGAATAATGTAGGGCGAGAATGCCAAGGCATTATCAAACACTTTCAAAGGAAGTCTATTCTTGATGGATCTTTTTATTTTGATATGCATTTGGCGGAAGATGGAACATTAAGAAGTGTATTCTGGGCGGATGGTAGGTCGAGAGCTGCATATGCTCAATTTGGTGATGTCCTTGTGTTTGATGTGACTTACCAAACAAATAAGTTCAAGTTTCCTTTTGCCCCTTTTGTTGGGGTTAATCACCATGGGCAATCAATTTTATTTGCTGCCGCGTTGTTAGAAGATGAAACGGAGGCAACATATACATGGTTGTTTGAACAATTTCGAGCATGTATGTTTGAAAAGTCTCCAGTTGCTATCATCACTGATCAAGACAAAGCTATGGGAAAAGCAATTGCCAAGATATTTCCAGGAGCACGACATCGTTTTTGTGCATGGCACATGAAAAAACATATTATGGAACATACTCAAGCACTACGCGCACAATTTAAGGAGAGTTTTGATACCGACTTTCATGCATGGTATAAAAGTCGAGACATTGATGGGTTTGAAGGTAAGTGGGAAACGTTAAGGACTAAATATGATATTAAAGCTGGTACTTGGTTGGCTAACATGTATGTTTCACGTCATCATTGGGCAAAGGCATATTTGAAGGATACTTTTTGGGCCGGAATGACCACAAGTGGACGAAGCGAGAGCATCAATGCATTTTTTGATGGATACGTCAACTCTAACACAATGTTAAATGACTTTGTTACCCAATATGACAAAGCAATCAAGTGTAGGAGGGATGCCGAAGAAGATGAGGATTTTAAGACTAGAAATACAAAAGCTATTTTGGAGACTTCCTTTCAAATTGAAGCAATAGCTGGTGAGCGCTACACAAGAAAAATATTTAATATCTTTAAAAAGGAGTGGATGGCAGCCGTACTTGATTTTGAGCATGAAAAGATTTCAATGGACGAAAATCATAGCAGGTATTGGGTGGGATCTCCTGAAGTTGATAAAGAGTGGTGGGCAATTGTTGAATATCATTTGACAGAAACCTTCACAGCTAATTGTTCGTGTGCAAAATTTGAGACTATAGGAATTTTGTGCAAACATATTCTATACATCATGAAGAAGAAACAAATAAAAATCATTCCTGAAAAATATATTTTGTCTAGATGGACAATGAATGCAAGCTATACGGTTAAAAATCTTATAGCCGATCATGCTGAAACAACTAATAATGAAGTTAGTGCTTTAGCCTTGTGGTCAGTGCACTCCAAGTGCAATATGGCTATTGCTGAAGCAAGAGATTGTATTTCTGAAATTAGAAGGTTTGACGCTTTTGTTGCTGATTTTATTCATCAACAATTGGAAAGAAAGAAAAAGAGAATTGAAGATGAAGCAATTCCCCAAATTGTTCCTTCACTAACTCCTGGAATTGTCTCGCAAGTTTCACTCATCAATGATGTGCGTGATCCCATCCATCCAATCAAAACTAAAGGGCGTCCTAAGGTTGCTTCACGAATAAAATCTGGCATTGAACTATCTTCAAAACAACAAAAGACTTGCAGTTATTGTGGAGGAAAGGGTCATAATAAGACCGGTTGTCAGAAGCACAAGATGGATGTTGCAAGAGAGAAGCAAAAGGAATAA 2391 0.368 MNHSQITTIEDIDTSGILVCYDDVVDLEKDGDEFIDNDHCEIMENEDGDEFIDNDLCEIMENEDEDHMQGNVHEIMGDDDSKFSETSFLCRVFGTSEEAYAFYNDYAKGKGFEIRKQFFNKIAKTQQIYRWRYVCSKEGIKRVNDNAIKRRRDTRTNCLAMLQIKLVDGVWKVEKFNDTHNHPLINTPAKGKKFPSQNELRRSNVTKSLVSMLYEEGLTSSKISKVVNAMDKDVNITPVQITTIISSQRKNNVGRECQGIIKHFQRKSILDGSFYFDMHLAEDGTLRSVFWADGRSRAAYAQFGDVLVFDVTYQTNKFKFPFAPFVGVNHHGQSILFAAALLEDETEATYTWLFEQFRACMFEKSPVAIITDQDKAMGKAIAKIFPGARHRFCAWHMKKHIMEHTQALRAQFKESFDTDFHAWYKSRDIDGFEGKWETLRTKYDIKAGTWLANMYVSRHHWAKAYLKDTFWAGMTTSGRSESINAFFDGYVNSNTMLNDFVTQYDKAIKCRRDAEEDEDFKTRNTKAILETSFQIEAIAGERYTRKIFNIFKKEWMAAVLDFEHEKISMDENHSRYWVGSPEVDKEWWAIVEYHLTETFTANCSCAKFETIGILCKHILYIMKKKQIKIIPEKYILSRWTMNASYTVKNLIADHAETTNNEVSALALWSVHSKCNMAIAEARDCISEIRRFDAFVADFIHQQLERKKKRIEDEAIPQIVPSLTPGIVSQVSLINDVRDPIHPIKTKGRPKVASRIKSGIELSSKQQKTCSYCGGKGHNKTGCQKHKMDVAREKQKE 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1956g00007 796 MobiDBLite consensus disorder prediction 781 796 - -
Gabi1956g00007 796 ProSiteProfiles Zinc finger SWIM-type profile. 593 626 IPR007527 GO:0008270
Gabi1956g00007 796 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 668 IPR031052 GO:0006355
Gabi1956g00007 796 MobiDBLite consensus disorder prediction 775 796 - -
Gabi1956g00007 796 Pfam FAR1 DNA-binding domain 102 185 IPR004330 -
Gabi1956g00007 796 SMART 26again6 601 628 IPR006564 GO:0008270
Gabi1956g00007 796 Pfam MULE transposase domain 306 399 IPR018289 -
Gabi1956g00007 796 Pfam SWIM zinc finger 599 619 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1956g00007 Gabi-Chr1956 156701 159245 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1956g00007 MULE 4.2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1956g00007 - - lsv:128127215 712.605