Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1955g00008 ATGGCAGCTGCAGAATCTTCTCGCGAGGAGAATGTTTACATGGCGAAGTTGGCAGAGCAGACGGAGCGATATGAGGAGATGATTGAGTTCATGGAGAAGGTTGTGAAGACGGTGGATGTTGATGAGTTGACTGTGGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTTATTGGGGCAAGAAGGGCTTCTTGGAGGATCATTTCCTCCATTGAGCAGAAGGAGGAGAGTAGGGGCAATGATGACCATGTTGCTCTTATAAAAGAGTACAAAACCAAGATTGAGACTGAACTCAGCAAGATCTGTGATGGGATTTTGAGCCTCCTTGACTCTAATCTGATCCCATCTGCTGCATCTCCCGAATCTAAATTGTTTTACCTTAAAATGAAGGGTGATTACCACAGGTACCTTGCTGAGTTTAAAAGTGGGTCAGAAAGAAAAGAAGCTGCGGAGAATACTTTGTTAGCTTACAAATCGGCTCAGGACATTGCTCTTGCAGAACTGGCCCCAACCCACCCGATAAGGCTGGGTCTTGCACTCAACTTTTCTGTGTTCTATTATGAAATCCTTAACTCCCCCGATCGTGCTTGTAATCTTGCGAAACAGGCATTTGATGAGGCAATTTCTGAGCTTGACACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAACTTCTGCGAGACAATCTGACTTTGTGGACATCTGACATCGCGGATGAAGCTGGAGATGAGATCAAGGAAACATCTAAGCAACAAACAGATGATGGGCAGCAGTAA 789 0.4499 MAAAESSREENVYMAKLAEQTERYEEMIEFMEKVVKTVDVDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVALIKEYKTKIETELSKICDGILSLLDSNLIPSAASPESKLFYLKMKGDYHRYLAEFKSGSERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIADEAGDEIKETSKQQTDDGQQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1955g00008 262 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Gabi1955g00008 262 PANTHER 14-3-3 PROTEIN 8 241 IPR000308 -
Gabi1955g00008 262 SMART 1433_4 8 251 IPR023410 -
Gabi1955g00008 262 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Gabi1955g00008 262 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Gabi1955g00008 262 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Gabi1955g00008 262 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Gabi1955g00008 262 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Gabi1955g00008 262 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Gabi1955g00008 262 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Gabi1955g00008 262 Pfam 14-3-3 protein 14 238 IPR023410 -
Gabi1955g00008 262 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Gabi1955g00008 262 Coils Coil 14 34 - -
Gabi1955g00008 262 PIRSF 14-3-3 2 250 IPR000308 -
Gabi1955g00008 262 Gene3D - 1 251 IPR036815 -
Gabi1955g00008 262 FunFam 14-3-3 protein epsilon 3 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1955g00008 Gabi-Chr1955 48504 51892 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1955g00008 6 261 14-3-3 family AT3G02520 86.770 1.28e-167 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1955g00008 K06630 - csin:114285823 468.003