LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi1954g00007	ATGGCCGATAAACAAGCCCAATTGAACGGCGCTTACTACGGCCCCTCCATTCCGCCGCCGACGAAAAAATCCTACCACCGCCCGGGCCGTGGCGGCGGCGGGGGTTGCTTCAGCTGCTGCTGCGGCTGCATCTTCAACTGCATCTTCGGCATCATCTGCAAACTCTTAACCACCATCATCATCATGGTGGCCATCGCCGCTTTTCTCTTCTGGCTCATCGTGCGTCCCAACGTGGTCAGGTTCTACGTCACCGATGCCACACTCACCCAATTCAACTTCACCAACAACAACACCCTCCACTACAACCTCGCCTTAAACATCACGATCCGTAACCCAAACAAGAGGGTTGGGATCTACTACGACTACATCGAAGCACGCGCGTTGTACCAGGATGTTCGGTTCGATTCACAGACACTCGGAACCTTCTTTCAGCACCACAAGAACACTAGTGTTTTGAACACTGCTTTCAAAGGACAACAAGTGATGATCCTCGGCACCGACCAGACTTCGGAGCTGAACAAGGATAAGAGTTCTGGGGTTTACCATATCGATGTGATGCTGTTCCTCAATGTGAGGTTCAAGATGGGTTTGTTCAAATCCGGCAAGGTCAAGCCCAAGATTCGTTGTGATTTGCAGGTTCCTCTCAAATCACACAACGGAACCTCGCCGGCCGGTGGGTTTCAGACCACCGAGTGCGGCTGGGAATACAGATGGATCCATTAG	723	0.5242	MADKQAQLNGAYYGPSIPPPTKKSYHRPGRGGGGGCFSCCCGCIFNCIFGIICKLLTTIIIMVAIAAFLFWLIVRPNVVRFYVTDATLTQFNFTNNNTLHYNLALNITIRNPNKRVGIYYDYIEARALYQDVRFDSQTLGTFFQHHKNTSVLNTAFKGQQVMILGTDQTSELNKDKSSGVYHIDVMLFLNVRFKMGLFKSGKVKPKIRCDLQVPLKSHNGTSPAGGFQTTECGWEYRWIH	240

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi1954g00007	240	Pfam	Late embryogenesis abundant protein	106	209	IPR004864	-
	Gabi1954g00007	240	PANTHER	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	19	215	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi1954g00007	Gabi-Chr1954	199206	200203	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi1954g00007	73	225	SNARE and Associated Proteins	AT1G32270	37.255	1.11e-29	111

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi1954g00007	-		-	aprc:113873272	315.079