Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1954g00003 ATGCGCAGATTTGTGATTTGGGTGGTTGCTGTAATTACAACAAAGAAAGCTGACAATAATGCATCTACCATTGCTGTCAACAGGTTGAATGACACCTTGTTAGTTCACACCTCAGCCAAGGTACTTAACAATTTTAAGAACCTATTTAAGAAGATATTTAAGAAAGCTGATAAGGTTACAATAAAAAAAGCTGACAATAATGCATCTACCATTGCTGTCAATAGGTTGAATGACACCTTGTTAGTTGACACCTCACCCAAGCTGATAAGGTTGCTTTTCTTGCTTGACAACCCATTGTCAGGCTGTCAATTACTGGGACAAGAAATCATTGAAGGATTTGAGAGTGAACTCAGTGAAGAGGGTTTTAGTTATAAAATTATTGGAATGAGTGCAAGAGCCGTGCTATTGATGGAACACTCCCAAATAACAACTACTGAAGATATGAATGAAAGTGTAGTATCTTTAGATGACATTGTTGAATTGGAGAAAGAAAGTGATGAGTTAAGTGAAGATGGTCAATGTGAAATTATGAATCAAGACAAAGATGGTGATTGTATGCAAGACAATTGCCAAGAAATTATGGGAGATGATAGTGAGTTTAATGAGCCTCCTATATTGGGTAGAGTTTTTGAGACAGCTGAAGAAGCCTACGATTTCTATAATGATTTTGCAAAAGTTAAGGGGTTCGGAATACGTAAGCGTTACTTTAACAGGAGCAGAAGAACACAACAACCATGTTTGTGGAATTATGTGTGCTCAAAACAAGGTGTCAAGAATCTAAATGATAAAAGAATTGATGTTAGCAATGTCAAAAGGCGAAGGGATACACGGACTGATTGTTCGGCGATGTTCCAAATAAAGTTGGTGAACGGATTATGGAAAGTAGAGAAGTTCAATGATTCACATAATCATCCATTGATTAACACTCCATCAAAGGTGACCAAGTTTTCTTCTCATAATGATTTACGTCGCTCAGATTTTACTAAATCCATTGTTTCTAAACTTTATGGGGAGGGTTTAACGTCTTCAAAAATCTCAAAGGTAGTGAATGCTATGAACAAAGAAGTTAACATCACTCTGGATCAAATTAGCACTATTATATCAAGCCAGCGTAAGAATAATGTAGGACGAGAATGTCAGGGCATCATCAAACACTTTCAAAAGAAGTCTGCTCACGATGGATGTTTTTATTTTGATATGCAGTTGGCAGAAGATGGTACGTTAAGAAGCGTCTTTTGGGCAGATGGTAGGTCGAGAGCTTCCTATGGTCAATTTGGGGAAGTCCTTGTCTTTGATGTGACTTACAAAACAAACAAGTTCAAGTTTCCTTTTGCTCCTTTTGTTGGGGTTAATCACCATGGGCAATCAATTTTATTTGCTGCTGCTTTGTTAGAGGATGAAACAGAGGCAACCTTTACTTGGTTGTTTGAACAGTTTCGGATATGCATGTTTGAGAAGTCTCCTGTTGCTATTATTACTGATCAGGACAAAGCAATGGGGAAAGCAATTGCTAAGATATTTCCAAGAGCACGACATCGTTTCTGTGCATGGCATATCAAAAAGCATATTTTGGAGCATAGTCAAGCATTACGTGCACAATTTAAAGATAGTTTTGATGTTGACTTTCATGCATGGTATAAAAGTCGAAGCATAGATGAATTTGAAGACAAATGGGAAGCATTAAGAACTAAATATGATATTAAAGCAAGTAGTTGGTTGGCTAACATGTATGCTTCACGTAACCATTGGGCAAAAGCATACTTGAAAGATACTTTTTTTGTTGGAATGACTACAAGTGGCCGAAGTGAGAGCATCAATGCATTTTTTGATGGATATGTCAACTCCAACACAATGTTAAATGACTTTGTTACCCAATATGATAAAGCAATCAAGTCTAGAAAAGATGCAGAGGAAGATGAAGATTTTAAAACTAGAAATACAAAAGCAAATTTGGAGAGTAATCATCCAATTGAAGCAATAGCTGGAGAGCGCTACACAAGAAAACTGTTTGAAATTTTTAAAAAAGAGTGGAGGGCTGCCACACAAGATTACTTTCACGAAAAGATGTCAACAGACGAGCATAATATTAGGTACCGTGTGGGGTCTCCCAAAGTTAATAAAGAGTTATGGGCAATTGTTGATTACAATTTGATAGAAAGTTCTACTACTCATTGTTCTTGTGCAAAGTTTGAGACTATGTGGATTTTATGCAAACATATTTTGTACATCTTCAAGAAGAAACAAATGATGACCCTTCCTGAAAAGTATATTTTAACTAGATGGACCATGAATGCAAGCTATAAGGCTGAAAATATTTTGTCTGTTCATTCTGAAACAACTACCAGTGAAGTAAGTGAATTGTCTTTGTTGTCAACTCAGTCGAAGTGCAATTTAGCTATTTCTGAAGCAAAAGATTGTTTTCATGAAATTAGAAGATTTGATGCTATTGTTGATGAATTTATTCAACAACAATTAGAAAGAAAGAGAAAAAGAATTGATGAGGAAACCTTAAGCTCAACTGTACCTTCACAAAGTGGTTTCATTCCTTCTCAAGTTTCACTTAATTATGTTCGAGACCCCACTCAAGCAGTCAAAACAAAGGGGCGTCCAAAAGTTGCTTCACGAATTAAATCAAGCATTGAGTTAGCAGCCAAACAACAAAAGACTTGCAGTTATTGTCGAGAGAAAGGTCATAATAAGACCAGTTGTAAGAAGCAAATGATGGATGTTGCAAGAGAGAAGCAAAAGGAATAA 2754 0.3627 MRRFVIWVVAVITTKKADNNASTIAVNRLNDTLLVHTSAKVLNNFKNLFKKIFKKADKVTIKKADNNASTIAVNRLNDTLLVDTSPKLIRLLFLLDNPLSGCQLLGQEIIEGFESELSEEGFSYKIIGMSARAVLLMEHSQITTTEDMNESVVSLDDIVELEKESDELSEDGQCEIMNQDKDGDCMQDNCQEIMGDDSEFNEPPILGRVFETAEEAYDFYNDFAKVKGFGIRKRYFNRSRRTQQPCLWNYVCSKQGVKNLNDKRIDVSNVKRRRDTRTDCSAMFQIKLVNGLWKVEKFNDSHNHPLINTPSKVTKFSSHNDLRRSDFTKSIVSKLYGEGLTSSKISKVVNAMNKEVNITLDQISTIISSQRKNNVGRECQGIIKHFQKKSAHDGCFYFDMQLAEDGTLRSVFWADGRSRASYGQFGEVLVFDVTYKTNKFKFPFAPFVGVNHHGQSILFAAALLEDETEATFTWLFEQFRICMFEKSPVAIITDQDKAMGKAIAKIFPRARHRFCAWHIKKHILEHSQALRAQFKDSFDVDFHAWYKSRSIDEFEDKWEALRTKYDIKASSWLANMYASRNHWAKAYLKDTFFVGMTTSGRSESINAFFDGYVNSNTMLNDFVTQYDKAIKSRKDAEEDEDFKTRNTKANLESNHPIEAIAGERYTRKLFEIFKKEWRAATQDYFHEKMSTDEHNIRYRVGSPKVNKELWAIVDYNLIESSTTHCSCAKFETMWILCKHILYIFKKKQMMTLPEKYILTRWTMNASYKAENILSVHSETTTSEVSELSLLSTQSKCNLAISEAKDCFHEIRRFDAIVDEFIQQQLERKRKRIDEETLSSTVPSQSGFIPSQVSLNYVRDPTQAVKTKGRPKVASRIKSSIELAAKQQKTCSYCREKGHNKTSCKKQMMDVAREKQKE 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1954g00003 917 Pfam FAR1 DNA-binding domain 218 307 IPR004330 -
Gabi1954g00003 917 ProSiteProfiles Zinc finger SWIM-type profile. 715 748 IPR007527 GO:0008270
Gabi1954g00003 917 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 189 785 IPR031052 GO:0006355
Gabi1954g00003 917 Pfam MULE transposase domain 428 521 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1954g00003 Gabi-Chr1954 50128 55058 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1954g00003 MULE 1.6e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1954g00003 - - lsv:128127215 694.886