Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1952g00012 ATGGCATCTTTATCTTCCCTCAGAGCCACCTCACACCGCCTTTCTCAGCTCCGATTCATCACCAAGCCCCACCCTTTCCTTTCCCCTCATTCACTCCCATTCTATTTCTCAATCACCCCCAAAACAAAGAAATTGAGTCGATTCCGATTATTCTCAATGGCTGCAGAACCGAAGGAGTCACCTGCTAACAACCCCGGTCTCCATGCAACTCCAGATGAAGCTACTAAGGGATACTTTATGCAACAAACTATGTTTAGAATCAAAGACCCCAAAGTGAGCCTTGATTTTTATTCTCGCGTTTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCAGAGATGAAGTTCAGCCTGTACTTTGTGGGCTATGAGGATACAGCAGAAGCTCCAACTAATCCAGTTGATAGAACAGTTTGGACCTTTGCTCAGAAGGCTACAATTGAACTGACACATAACTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGGTACCACAATGGCAATTCTGAACCTCGCGGCTTTGGACACATTGGCATAACTGTTGATGACACCTACAAGGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACTAGATGATGGGAAAATGAAAGGGATTGCATTTATTAAGGATCCTGATGGATACTGGATTGAAATATTTGATAAAAAAACAATTGGAAATTTAACACAAGCTGCTGCTTAA 714 0.423 MASLSSLRATSHRLSQLRFITKPHPFLSPHSLPFYFSITPKTKKLSRFRLFSMAAEPKESPANNPGLHATPDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFVGYEDTAEAPTNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFQNLGVEFVKKLDDGKMKGIAFIKDPDGYWIEIFDKKTIGNLTQAAA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1952g00012 237 Gene3D - 55 232 IPR029068 -
Gabi1952g00012 237 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 82 223 IPR004360 -
Gabi1952g00012 237 NCBIfam lactoylglutathione lyase 80 228 IPR004361 GO:0004462|GO:0046872
Gabi1952g00012 237 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 69 225 IPR029068 -
Gabi1952g00012 237 ProSitePatterns Glyoxalase I signature 1. 82 103 IPR018146 GO:0004462|GO:0046872
Gabi1952g00012 237 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 31 231 - -
Gabi1952g00012 237 CDD GlxI_Zn 80 224 - -
Gabi1952g00012 237 ProSitePatterns Glyoxalase I signature 2. 167 183 IPR018146 GO:0004462|GO:0046872
Gabi1952g00012 237 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 79 226 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1952g00012 Gabi-Chr1952 161129 165924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1952g00012 26 237 Calmodulin-binding Proteins AT1G08110 74.654 1.11e-112 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1952g00012 K01759 - gmx:100779383 424.476