Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1952g00003 ATGGCCAAGCTCAGAGTAAGAAGCACCATAAAAAAGAAGGTTGAAGGAAGCATTTTGAAGCTCATCAAGATTATCTTTGAGAAGCATCAAAAGAGAGTCTTAAAAGGAAGAAAGATTATATCAAGTTCATACTTTGACGATTATGAAGGAGGAGAAGACACAACCACTGTGCCAGAGGATGTGAAAGCAGGACACTTTGCTGTGGTTGCTGAAGATGGAGAGGAACTAAAGAGATTTGTGGTGCCATTGAGGTTTTTAACAAACCCAACATTCTTGAGGCTATTGGAGCAATCAGCTGAAGAGTATGGGTTTGATCAAGATGGTGCACTAACCATTCCTTGCAGCCCTAGTGAGCTTGAGATGTTATTAGCTCAGAGTTTGAGTATAAAATCTATGTAA 399 0.3985 MAKLRVRSTIKKKVEGSILKLIKIIFEKHQKRVLKGRKIISSSYFDDYEGGEDTTTVPEDVKAGHFAVVAEDGEELKRFVVPLRFLTNPTFLRLLEQSAEEYGFDQDGALTIPCSPSELEMLLAQSLSIKSM 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1952g00003 132 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 122 IPR003676 GO:0009733
Gabi1952g00003 132 Pfam Auxin responsive protein 31 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1952g00003 Gabi-Chr1952 46225 46623 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1952g00003 58 123 Calmodulin-binding Proteins AT3G43120 50.000 1.28e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1952g00003 K14488 - qsu:112024380 140.969