Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1951g00001 ATGATTTCCTCGTTGAGACAACCTAGTATAGGGATCAGTGGTTCTGATTTTGTTTTGAGGAAAATACATGCAACCCCAATTCAGCCAAGGTCGTTTTTACCTTCTCTGTCAAAAGAAAAAGCTCAAAGATCTGTTGTTTGTGTGCAAAAGCCTCTTCACCTTGCATCTCTTGGTGCGGGGTCTTTTGGGTCAGTGAAGAATTTTGAGTCAGCTAAGAATTTTGGGAGGGATGATTTGGTGAAGTGTGGAGCTTATGAGGCAGATAGATCAGAGGTTGAAGCTGCAGGTACACCATCAGTGGCTGTTAATAAGGTGAAAATTGGGATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCCTACCCGTACCCTTGGCTTACTTCAACTCTTTCACTTGCATGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACCAGAATAGCAGAGACGCCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCTGCAACGGTTAGTATGTCAAAAGTTGCAGTATCATTTACCCATATTATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCGAGATTTATTTTGGGTGAGACCTTCCCTGTGCCAGTCTATCTGTCATTAATTCCAATCATTGGTGGATGTGCACTTGCTGCGGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTCAGGAATATCTTTTCAAAAAAGGGCATGAAGGGAAAGTCTGTCAGCGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTCGCAATTCTCACACCCTTCGCAATTGCTGTGGAAGGACCGCAGATGTGGGCTGCTGGATATGAAACAGCCCTCTCTCAAATTGGACCCCAATTCATATGGTGGGTAGCAGCTCAGAGTATATTTTATCATCTGTACAATCAGGTTTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCAATTATTATCTTCCACACACCAGTTCAGCCCATCAATGCTCTTGGAGCTGCTATTGCTGTCCTTGGAACCTTCTTGTATTCACAGGCAAAACAATAG 1197 0.4202 MISSLRQPSIGISGSDFVLRKIHATPIQPRSFLPSLSKEKAQRSVVCVQKPLHLASLGAGSFGSVKNFESAKNFGRDDLVKCGAYEADRSEVEAAGTPSVAVNKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAETPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGYETALSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAVLGTFLYSQAKQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1951g00001 398 PANTHER SOLUTE CARRIER FAMILY 35 106 397 - -
Gabi1951g00001 398 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Gabi1951g00001 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 241 - -
Gabi1951g00001 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1951g00001 Gabi-Chr1951 12192 17317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1951g00001 37 397 Antiporters AT5G54800 79.348 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1951g00001 K15283 - gmx:100801832 677.937