Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1948g00001 ATGGAGCCAGGTGCTCACATCACCTTTGTGTCTATTCCTACTGGGGGCAATGATCTCAAAAGGATTCACTTCTGCCGAGACATGTTTGATAAGCCGCGAGCCCAGAGGTTGTGGGCTGAGAATTACGACAAGATCAGGGAGCTTCATAATATCCAGAATTTAAATCAACATGTTTTCAACACTCCTGCAAGGTCTGATGATGATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACATGGATTCGACTCCGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGATATCAAGGGCTAACAACCCTACTGACAATGACATGGATGCTGAATGGGTTGAGCAGGATGATCCTGGAGTGTCAATCACTTTGAAGAGGTCAGCTAATGGGACCAGGCAAATTCGCCGTATCAAATTCAGCTGGGAAATTTTTGATGCAGATGCAGCCAAGGATTGGTGGCTGCGCAACAGGGTTCGAGTTCATGCTCAGCATATGTGA 528 0.4716 MEPGAHITFVSIPTGGNDLKRIHFCRDMFDKPRAQRLWAENYDKIRELHNIQNLNQHVFNTPARSDDDENSGESEQDIPMASMLNMDSTPGNFHAPAGNMGYFHGGISRANNPTDNDMDAEWVEQDDPGVSITLKRSANGTRQIRRIKFSWEIFDADAAKDWWLRNRVRVHAQHM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1948g00001 175 Pfam Transcription factor regulating root and shoot growth via Pin3 1 49 IPR013591 -
Gabi1948g00001 175 Pfam Transcription factor regulating root and shoot growth via Pin3 120 174 IPR013591 -
Gabi1948g00001 175 ProSiteProfiles BRX domain profile. 120 175 IPR013591 -
Gabi1948g00001 175 PANTHER PROTEIN BREVIS RADIX-LIKE 1 2 174 IPR044532 -
Gabi1948g00001 175 ProSiteProfiles BRX domain profile. 1 50 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1948g00001 Gabi-Chr1948 4844 5956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1948g00001 1 175 Major Intrinsic Protein MIP AT1G31880 44.000 6.85e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1948g00001 - - jre:109014251 178.333