Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1946g00001 ATGGATATTCAAATCCTCTACTTTACATCCATTTTCTCCTTTTTCATTCTTATGCTTATGGCACACAAAATAGTGACCAAGAAATCTAACTCAACTCCAAATTTACGACCAGGACCATGGAAGCTACCTATCATAGGGAACATACACAACCTTGTTAGCTCACTTCCTCCCCATCGTCAGCTAAGAGATTTGTCAGCAAAATATGGACCCTTGGTGCATTTGAAGCTTGGAGAGGTTTCTACCATTGTGGTCTCATCCCTAGATTACGCAAGGGAGGTGTTAAAAACTCATGATCTTATCTTTGCATCAAGGCCTCCTATCCTAGCTTCAAAGATAATGAGTTATGATTCTAAGGGTATAACCTTTGCCCCTTATGGTGATTATTGGAGACAGTTAAGGAAGATTTGTGCATTGGAGCTATTAAGCTCAAAACGTGTCCAATCTTTCCAACCAGTAAGAGAGGAAGAGTTCACTAACCTCATCAAATGGATTACTTCAAAAGAAGGATCACCCATCAATCTCACCAAAGAAGTGATTTCAACAATATCTACAATCACTTCAAGGACAGCCCTTGGAAAGAAGTGCAAGGACCATCAACAATTCATATCAGTGATAAAGGAAGTCATAGATTTTGCTGGAGGTTTTCACTTGGAAGATTTATACCCTTCAGCTAAATGGCTTGAGCACATCTCTGGGTTGAAGCCTAAGCTAGAGAAGTTGAAGCAAAAATCTGATAAGATATTGCAAAACATCATCAATGAGCATAGAGAGGGTAAGTTAAGGAGTGCTCAAGGCCAGGATGAAGATGCAAGGGAAGATCTTGTAGACGTGCTGCTGAAGCAGGAGTTTTGCTTAAGTGATGATAGTATCAAGGCTGTGATCTTGGATATATTTGGAGCTGGAAGTGAAACATCAGCTACAACAATAACATGGGCAATGGCAGAAATGATTAAAAATCCAAGAGTAATGAAGAAGGTACAAGATGAGGTAAGAGAGGTATTTGAAGAAGAAGGAAATCCCAATGAAAGTGCCATTGAGAAACTAAAATATTTGAAATCAGTTGTGAAAGAGACATTAAGATTACACCCTCCTGTTGCTCTTTCACTTCCAAGAGAATGTGGACAAGCTTGTGAGATTAAGGGGTATCATATACCGGTGAAAAGCAAGGTCATCGTGAATGCTTGGGCAATTGGAAGAGATCCAAATCTTTGGAATGAGGCTGAGAGGTTTTATCCTGAAAGGTTCATTGAAAGTTCTTGTGACTACAAAGGCAATAATTTTGAATTCATCCCATTTGGTGCTGGGAGAAGAATATGCCCTGGCCTCACATTTGGGTTGATCAACGTTGAGTTTCCACTTGCGTTGTTGATGTATCATTTTGATTGGAAACTGCCCAATGGAATGAAAAACGAAGATTTGGACATGACTGAGACTTTTGGAATAACTGTTGGCCGAAAAGATGATTTGTACCTGATTCCCATTACTTCTCATTGTTAG 1497 0.3955 MDIQILYFTSIFSFFILMLMAHKIVTKKSNSTPNLRPGPWKLPIIGNIHNLVSSLPPHRQLRDLSAKYGPLVHLKLGEVSTIVVSSLDYAREVLKTHDLIFASRPPILASKIMSYDSKGITFAPYGDYWRQLRKICALELLSSKRVQSFQPVREEEFTNLIKWITSKEGSPINLTKEVISTISTITSRTALGKKCKDHQQFISVIKEVIDFAGGFHLEDLYPSAKWLEHISGLKPKLEKLKQKSDKILQNIINEHREGKLRSAQGQDEDAREDLVDVLLKQEFCLSDDSIKAVILDIFGAGSETSATTITWAMAEMIKNPRVMKKVQDEVREVFEEEGNPNESAIEKLKYLKSVVKETLRLHPPVALSLPRECGQACEIKGYHIPVKSKVIVNAWAIGRDPNLWNEAERFYPERFIESSCDYKGNNFEFIPFGAGRRICPGLTFGLINVEFPLALLMYHFDWKLPNGMKNEDLDMTETFGITVGRKDDLYLIPITSHC 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1946g00001 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Gabi1946g00001 498 SUPERFAMILY Cytochrome P450 37 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 Pfam Cytochrome P450 37 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 Gene3D Cytochrome P450 28 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PANTHER OS08G0105600 PROTEIN 60 495 - -
Gabi1946g00001 498 CDD CYP71-like 67 489 - -
Gabi1946g00001 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1946g00001 498 FunFam Cytochrome P450 71D8 28 493 - -
Gabi1946g00001 498 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1946g00001 Gabi-Chr1946 20118 22722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1946g00001 14 493 Cytochrome P450 AT3G26310 41.212 5.32e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1946g00001 - K13267 gmx:100813216 772.311