Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1945g00004 ATGGTGTTCTCTACACCAAATCAGGGATGTGATGCAAATAGATGGGGAAGAAACAAAATCTTTGCACTCCAAGTCCTTAAAGGGAGGTGGTTCATGGTGTTTTCTTCATTTATGATAATGTCAGTATCAGGAGCCAGCTACATGTTTAGCCTTTACTCAAGAGAAATCAAGTCAGTTCTAGGCTACGACCAATCCACTCTCAATTTGTTGGGCTTCTTCAAAGACTTGGGTTCCAACATTGGTATTCATTCAGGCCTAATCAACGAGGTCTCACCACCTTGGGTTGTCTTAACTATTGGTGGGATTCTCAATTTTTTTGGGTATTCTATGATTTGGCTTACTGTGACCAGAAAAATTGCAAAACCCCAACTGTGGAACATGTGCTTGTACATCTTTATTGGAGCCAATTCTCATTGTTTCACCAACACTGGAACTCTAGTTACCACTGTCAAAAATTTCCCTGGAATCAGAGGCATTGTATTGGGAATTTTGAGTGGGTATCTGGGTTTGAGTGCAGCAATCATCCCTCAGCTATACTATGCCTTCTATGGAGAGGACTCAAAATCTCTAATTTTGCTTATGTCATGGCTACCAACTGCTACAATTTTTGTTTTCCTACCAGTAATCAGGAACCACAGGGGTATTCAGCAGCCAAATGATTCAAAAGCCTTGTATAGGTTCCTCTACTTAACACTAGTCCTTTCAGTGTTTCTCATGATTATAATCATAGCGCAGAAATGTTTCACCTTCACAGAGAGTGAGCATTATATCACTACCACCGTGATGCTTCTCTTGCTAATCCTTCCACTTGGTGTTGTTATTGTGGAAGAGCACAAGATTTGGAAGAGCAAACAAGAACACATCAATTCTGAAGACCCTCCAAAGCCCATGAATGTAAGCATAGAAAAGCCTAATCAAGAGAAGCCTGCACAGGCTCCCCATTCAGAACTAACTAACCAAAAACGAGTTTCATGTTGGCAAAACATACTCAGGCCCCCGGATAGGGGTGAAGATCATACAATACTTCAAGCCATTTTTTGCCTTGACATGGTGATTCTTTTCTTTGCTATTATATGCGGAGTTGGTAGCAACCTGACTGTGGTAAATAACTTAAGTCAAATTGGAAAATCTTTAGGATATCCTGCACAAACTATAAGTACATTTATTTCCCTTATGGCCATTTGGATCCATCTAGGTAAAATTGGACAAGGGGTTGTCTCGGAATTTATCATAAACAAATTTAAACTCCCTAGGCCAATCATGCTCACAATGTTCCTTGTATTATCTTGTTTTGGTCACCTTTTAATTGCATTCAACGTCCCAAATGGTCTCTATGTAGCCTCAATTGTTATTGGGTTCTGCTTTGGGGCAAACTGGCCTTTAATATTTTCTATCATATCTGAACTTTTTGGTCTTAAATATTACTCAACATTGTACAATGTTGGGTCAATAGCAAGTCCAATTGGATCATACTTGCTGAGTGTAAGGGTTGCAGGGTATCTGTATGACAGGGAAGCAAGAAAGCAAATGACATCATTGGGGCTAAAGAGAAAGGCAGGGGAGGAGTTGAACTGCAATGGGGGTGAGTGCTACAAATTGGCTTTCATTATAATCACTGCAGTTTGCTTGTTAGGGGCTCTTGTGTCACTCATTCTGGTGCATAGGACTAGAGAGTTATACAAAAGTGACCTATACAAGAAATTCAGAGAAGAAGCTAGAACAGCTGAAACTGAAATGGCCAGGTCTCAGAACAGCATTGGACCACATACTGCTAATGATGGCTAA 1785 0.4034 MVFSTPNQGCDANRWGRNKIFALQVLKGRWFMVFSSFMIMSVSGASYMFSLYSREIKSVLGYDQSTLNLLGFFKDLGSNIGIHSGLINEVSPPWVVLTIGGILNFFGYSMIWLTVTRKIAKPQLWNMCLYIFIGANSHCFTNTGTLVTTVKNFPGIRGIVLGILSGYLGLSAAIIPQLYYAFYGEDSKSLILLMSWLPTATIFVFLPVIRNHRGIQQPNDSKALYRFLYLTLVLSVFLMIIIIAQKCFTFTESEHYITTTVMLLLLILPLGVVIVEEHKIWKSKQEHINSEDPPKPMNVSIEKPNQEKPAQAPHSELTNQKRVSCWQNILRPPDRGEDHTILQAIFCLDMVILFFAIICGVGSNLTVVNNLSQIGKSLGYPAQTISTFISLMAIWIHLGKIGQGVVSEFIINKFKLPRPIMLTMFLVLSCFGHLLIAFNVPNGLYVASIVIGFCFGANWPLIFSIISELFGLKYYSTLYNVGSIASPIGSYLLSVRVAGYLYDREARKQMTSLGLKRKAGEELNCNGGECYKLAFIIITAVCLLGALVSLILVHRTRELYKSDLYKKFREEARTAETEMARSQNSIGPHTANDG 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1945g00004 594 Pfam Nodulin-like 29 274 IPR010658 -
Gabi1945g00004 594 SUPERFAMILY MFS general substrate transporter 9 215 IPR036259 -
Gabi1945g00004 594 CDD MFS_Mch1p_like 28 546 - -
Gabi1945g00004 594 Gene3D MFS general substrate transporter like domains 344 562 IPR036259 -
Gabi1945g00004 594 MobiDBLite consensus disorder prediction 285 317 - -
Gabi1945g00004 594 SUPERFAMILY MFS general substrate transporter 263 558 IPR036259 -
Gabi1945g00004 594 Coils Coil 565 585 - -
Gabi1945g00004 594 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 563 - -
Gabi1945g00004 594 Pfam Major Facilitator Superfamily 353 557 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1945g00004 Gabi-Chr1945 184106 185890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1945g00004 12 571 Nodulin-like Gene Family AT2G39210 59.364 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1945g00004 - - gmx:100789645 863.988