Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1943g00022 | ATGGCTTTTCTCCTCAGCCAATCTCTCTTTATTTTTTCGTACTTTCTTCTTTCTTCTCTTCCAATCATAAATGCACTTTCAACTGTTTCCATTTCTGAAACTTCCAACCAAACATTTATTTGTGCCTTACAACAGCCAAACCAACAAGGAAAATCAAATCTTAACTGTACTAGCTTTCCTCCGGGGCTTGTCGTTAATCCCAACATTTCATATTCCGAGATTGTGGGTGGCAATGGATTTGTTTGTGCATTAAGGTCACCATCTAATTCTACTTCCATCATGGGCTGTTGGAGATTCTCTCCCAATGCTGCTACTAATGTTCCATATAAGCGTATCTACCGTGGACCCGTTATACAAGACATTGATGCTGGGAATTCCCATATCTGTGGCCTTGTAAATAGGGAAAATGGCCTCGACCTTGAGTGTTGGCAATGGCCTGGCTTCAATTCAAGCATGGGAGGGAAGAGGAACATGTCAAGCATTGCCGTGGGAGAGAATTTCTTATGTGGCTTATCAGAAACTGGGAACGTTACTTGCATGGGGAATAATACTAGAGTTGTTGGGCATGAGCCTAGTGGAAATTACTCTCTTGTTGCAGCTGGGTTTTGGCATGCTTGTGCTATTTCTCTTGATGGTAGCTTGGATTGCTGGGGAAACGTGGTGGGTGATAAACCACAAGGGAGTTTCGTTTCTTTGGCGTTGGGAGAGGATCGAAGTTGTGCACTTGGTTATAATGGAATGGTTGCTTGTTGGGGGTCGAATAATTTCAGCATGCCAAATAGATTGCAAGGGACTTTTTTTGAATCAATTGTAGCAAAGCGAAGTGTTTTCTGTGGTGTTGTGTCTTCTAATTATTCTTTGCTTTGTTGGGGTACTGAAATTCTTGAGTCAAATACCAAGGTGTTTGATAATGTCCTCCCAGGACCTTGTAGGAATGAATGTCCATGCGGGCCCTTGTCAGATTCTGCCAATTTCTGTGACTCTCCAGCCATCATTTGCAAGCCTTGTCCACCTGTTTTTCAATCTCCATTGCAGCCGCCGCCACCACCACCACCATCTCCACCCCAAAATGCAGCAGAAAGTGGTTGGAGTACCAAAATGGTGGCATTTCTAGTGGTTGGATGTGTTGGTTGCAGTTCCTTGTTGCTAGTCTTGGCTTTCTTCCTTTACAGGTACTGCAAAGGCAGAGGATGCCGTGTACATGACTCTGGCCGATTGGATGAGCCAGGGACTGAACCAGAAGCTCAAGCTGTCTCTGGAGTTCTGGAGAAGCGGTTGAGCCATGTAATTAGCATGGGAAATGGCAGCCATTTAGAGGAATTTCCCCTGCTAGTACTGGTTGAAGCCACCAACAATTTCTCAGAGGAGAAAAAAATTGGTATGGGTAGCTTTGGTTCAGTGTATCATGCCACACTGGAAGATGGTAAGGAAGTTGCTATAAAAAGAGCTGAGTTCTCGTCCACCTCTCCGTCCTATGCAGTTATGGGTGGCACCAAACGGCAAGAAGACAAAGACAATGCCTTTGTCAATGAGCTTGAATCTCTATCAAGACTCCACCATAAGAACCTAGTCCGGTTATTGGGTTTCTATGAAGACATGAATGAACGCATTTTAGTGTACGATTATATGAACAATGGTAGCTTAAATGATCACCTCCACAAGCTCCAGAGTTCTGCTCTCATGTCATGGCCACTTCGCATCAAGGTAGCTCTAGAAGCAGCAAGAGGTATAGAGTACCTACACAAGTATGCCACTCCACCAATCATTCATCGTGACATAAAGTCAGCTAACATATTATTAGATGCCAAGTGGACGGCCAAAGTTGCTGATTTTGGACTATCATTGATGGGTCCCGAAGATGAGGAGTCACACCTTTCACTTCTAGCAGCTGGTACACTTGGCTATATGGACCCTGAATACTATAGGCTTCAGCATTTGACCTCAAAGAGTGATGTGTACAGCTTTGGCGTGGTTTTGCTAGAACTGCTATCTGGGCACAAAGCCATCCATAAAAATGAGAATGGGGTGCCAAGAAATGTGGTAGATTTTGTGGTACCGTTCATTGTTCAAGATGAAATTCACAGGGTGTTGGACCCAAGAGTGCCACCCCCAACACCATTTGAGATTGAGGCCGTGGCGTTTGTTGGTTATTTGGCAGCAGATTGTGTTAGACTAGAAGGTCGAGATAGACCAACCATGTCTAAAGTTGTAAAGAGTTTGGAAACAGCACTTGCGGCGTGTTTACTCCAACCAATACTGTCGAGGTCCACCACTGCTTCTTCAGACTAG | 2289 | 0.4452 | MAFLLSQSLFIFSYFLLSSLPIINALSTVSISETSNQTFICALQQPNQQGKSNLNCTSFPPGLVVNPNISYSEIVGGNGFVCALRSPSNSTSIMGCWRFSPNAATNVPYKRIYRGPVIQDIDAGNSHICGLVNRENGLDLECWQWPGFNSSMGGKRNMSSIAVGENFLCGLSETGNVTCMGNNTRVVGHEPSGNYSLVAAGFWHACAISLDGSLDCWGNVVGDKPQGSFVSLALGEDRSCALGYNGMVACWGSNNFSMPNRLQGTFFESIVAKRSVFCGVVSSNYSLLCWGTEILESNTKVFDNVLPGPCRNECPCGPLSDSANFCDSPAIICKPCPPVFQSPLQPPPPPPPSPPQNAAESGWSTKMVAFLVVGCVGCSSLLLVLAFFLYRYCKGRGCRVHDSGRLDEPGTEPEAQAVSGVLEKRLSHVISMGNGSHLEEFPLLVLVEATNNFSEEKKIGMGSFGSVYHATLEDGKEVAIKRAEFSSTSPSYAVMGGTKRQEDKDNAFVNELESLSRLHHKNLVRLLGFYEDMNERILVYDYMNNGSLNDHLHKLQSSALMSWPLRIKVALEAARGIEYLHKYATPPIIHRDIKSANILLDAKWTAKVADFGLSLMGPEDEESHLSLLAAGTLGYMDPEYYRLQHLTSKSDVYSFGVVLLELLSGHKAIHKNENGVPRNVVDFVVPFIVQDEIHRVLDPRVPPPTPFEIEAVAFVGYLAADCVRLEGRDRPTMSKVVKSLETALAACLLQPILSRSTTASSD | 762 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1943g00022 | 762 | Pfam | Protein kinase domain | 453 | 738 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1943g00022 | 762 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 588 | 600 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi1943g00022 | 762 | ProSiteProfiles | Protein kinase domain profile. | 453 | 753 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1943g00022 | 762 | SMART | serkin_6 | 453 | 745 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1943g00022 | 762 | SUPERFAMILY | Protein kinase-like (PK-like) | 429 | 741 | IPR011009 | - | |
Gabi1943g00022 | 762 | FunFam | Serine/threonine-protein kinase-like protein CCR4 | 543 | 758 | - | - | |
Gabi1943g00022 | 762 | SUPERFAMILY | RCC1/BLIP-II | 109 | 293 | IPR009091 | - | |
Gabi1943g00022 | 762 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 38 | 749 | IPR044815 | GO:0004674 | |
Gabi1943g00022 | 762 | Gene3D | Transferase(Phosphotransferase) domain 1 | 543 | 748 | - | - | |
Gabi1943g00022 | 762 | Gene3D | - | 221 | 305 | IPR009091 | - | |
Gabi1943g00022 | 762 | Gene3D | - | 33 | 220 | IPR009091 | - | |
Gabi1943g00022 | 762 | ProSitePatterns | Protein kinases ATP-binding region signature. | 459 | 481 | IPR017441 | GO:0005524 | |
Gabi1943g00022 | 762 | CDD | STKc_IRAK | 459 | 741 | - | - | |
Gabi1943g00022 | 762 | Gene3D | Phosphorylase Kinase; domain 1 | 427 | 542 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1943g00022 | Gabi-Chr1943 | 152219 | 154870 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1943g00022 | 25 | 758 | Receptor kinase-like Gene Family | AT5G47850 | 52.387 | 0.0 | 702 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Gabi1943g00022 | Pkinase | 5.9e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi1943g00022 | - | - | pvu:PHAVU_011G003100g | 1090.49 |