Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1943g00015 | ATGACTCCAGTTAATTTGGCAGGTCAGTTTGGTGACACCACATACACCAAAGTGTTTGTTGGAGGATTGGCTTGGGAGACTCAAAAAGAAACCATGAAGAAGTATTTTGAGCAATTTGGTGAGATCTTGGAGGCTGTTGTCATCACTGACAAAGCCACTGGAAGATCTAAAGGCTATGGATTTGTTACTTTTCGGGAACCGGAAGCTGCCATGAGAGCCTGCGTGGATGCTGCTCCTGTAATTGATGGTAGGAGAGCTAACTGCAACCTTGCTTCTTTGGGTGTCCAGAGATCTAAGCCTTCAACGCCAAAGCATGGTGGAGGAGGAGGAGGAGGGAGGAACTTTAGGGTAATGAGTTCATTCCAGACAGGATATGGAGGGGGAGTGGGATCGGCTTTTCCTTCAGCAGCAACCTTCCCTCATTATGCCATCCAGCAAGGAATACCTTATAATGTTTATGGGTACTCTCCTTACTCGCCGGATTACACTTACCCTACGAGCTACTATAGTGTGTATGGAGGAGCAACGGCACAGTACCCAGTTTATGGAACGGGACCAGGAGGGATGATGACGGGTGCTGCAGCAGCGGCAGCGTTTTACCCATATCTGCAATACGGAGGAGAAGGGAGTGGCGCCGCCGCCTCAACCGGCGGTTATAGTTCCGGTCAGGGTTACGGTGTGAACTACCCGCCTCAGCTGTTTCAGTATTCTCCGATTGGTTCAACTGGTGGATACGCGCAGCACTATGGAACACCCATGTCTCTTGCACCTTCCCCTGCTTTGCAATCAGGCGTGACAATGGCTCTTCAAGCTCCGATTCCTCATCGCTAG | 831 | 0.503 | MTPVNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGGRNFRVMSSFQTGYGGGVGSAFPSAATFPHYAIQQGIPYNVYGYSPYSPDYTYPTSYYSVYGGATAQYPVYGTGPGGMMTGAAAAAAFYPYLQYGGEGSGAAASTGGYSSGQGYGVNYPPQLFQYSPIGSTGGYAQHYGTPMSLAPSPALQSGVTMALQAPIPHR | 276 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1943g00015 | 276 | Gene3D | - | 11 | 132 | IPR012677 | - | |
Gabi1943g00015 | 276 | SMART | rrm1_1 | 17 | 89 | IPR000504 | GO:0003723 | |
Gabi1943g00015 | 276 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 16 | 100 | IPR000504 | GO:0003723 | |
Gabi1943g00015 | 276 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 18 | 73 | IPR000504 | GO:0003723 | |
Gabi1943g00015 | 276 | FunFam | RNA-binding (RRM/RBD/RNP motifs) family protein | 10 | 97 | - | - | |
Gabi1943g00015 | 276 | PANTHER | BOULE-RELATED | 6 | 261 | - | - | |
Gabi1943g00015 | 276 | SUPERFAMILY | RNA-binding domain, RBD | 12 | 115 | IPR035979 | GO:0003676 | |
Gabi1943g00015 | 276 | CDD | RRM_RBM24_RBM38_like | 16 | 91 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1943g00015 | Gabi-Chr1943 | 110064 | 115842 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1943g00015 | 12 | 92 | C2H2 Transcription Factor Family | AT2G19380 | 43.210 | 6.10e-14 | 69.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi1943g00015 | - | - | aip:107629746 | 442.965 |