Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1931g00028 ATGGCTCTGTTAATGAAGCACCCCAGTTTTTCTTCAACTAGCTTAATGCTTTGTTTCATATTGTTATTAGTTTTATCCTACAAAGCAAAGGCTGTGGTGAAACTACCACCAAATTTTTCAATTCCTGCAGTCATAGCTTTCGGAGATTCGATAGTGGACACGGGCAACAATAACAAGATTAAAACACTTGTTAAGAGCAATTTCCCTCCTTACGGTAAAGATTTTGAGGGAGGAATCCCAACCGGTCGATTTTGTGACGGAAAAATTCCATCGGATCTTTTAGTTGAAGAGTTGGGTATTAAGGAGCTTTTACCAGCTTATAAGGATCCAAATCTAAAACCAAGTGACCTTATTACGGGAGTCTGCTTTGCTTCTGGTGCCTCTGGATACGATCCTTTGACGCCAAAAATAGCGTCAGTGATATCATTGTCCGATCAACTAGACATGTTCAAAGAATACATAGGGAAGCTTAAAAGCATTGTTGGAGAGGACAGAACAAACTACATCATAGCCAACAGTCTTTTCGTTGTGGTAGGTGGAAGTGACGATATTGCCAACACCTATTTTATTGCTCGTGTTAGACAACTACAGTATGATATTCCTGCTTACACTGACCTTTTGGTCAACTCAGCCTCTGATTTCATTAAGGAATTATATCAACTTGGAGCACGCAGAATCGGAGTACTCAGTGCACCACCGATTGGGTGCGTGCCATCACAGAGAACTCTGGCTGGAGGCAAACAAAGAGACTGCGCAGAAAAATACAATGAAGCAGCGATTTTATTTAACTCCAAACTATCAAAGGAAATGGATTCCCTTAACAATAACTCGCCAAATAGTAGGATCGTTTACATTGACGTTTACAACCCCCTACTTGACATCATTGTGAACTACCAAAAATATGGCTTTAAAGTTGTGGACAGAGGTTGCTGTGGCACAGGCCTAATAGAAGTTGCAGTTTTATGCAATCCTTTGGGTGCCACTTGTCCTGATGCTTCGGAATATGTTTTTTGGGATAGTTATCATCCTACCGAAGCAACATACAGACAGCTCATAGACCAAGTCCTTAAAAAATATTTGAATCGATTCCTCTGA 1095 0.4055 MALLMKHPSFSSTSLMLCFILLLVLSYKAKAVVKLPPNFSIPAVIAFGDSIVDTGNNNKIKTLVKSNFPPYGKDFEGGIPTGRFCDGKIPSDLLVEELGIKELLPAYKDPNLKPSDLITGVCFASGASGYDPLTPKIASVISLSDQLDMFKEYIGKLKSIVGEDRTNYIIANSLFVVVGGSDDIANTYFIARVRQLQYDIPAYTDLLVNSASDFIKELYQLGARRIGVLSAPPIGCVPSQRTLAGGKQRDCAEKYNEAAILFNSKLSKEMDSLNNNSPNSRIVYIDVYNPLLDIIVNYQKYGFKVVDRGCCGTGLIEVAVLCNPLGATCPDASEYVFWDSYHPTEATYRQLIDQVLKKYLNRFL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1931g00028 364 CDD SGNH_plant_lipase_like 42 359 IPR035669 -
Gabi1931g00028 364 SUPERFAMILY SGNH hydrolase 174 357 - -
Gabi1931g00028 364 Pfam GDSL-like Lipase/Acylhydrolase 44 353 IPR001087 GO:0016788
Gabi1931g00028 364 Gene3D SGNH hydrolase 34 360 IPR036514 -
Gabi1931g00028 364 PANTHER GDSL ESTERASE/LIPASE EXL3 23 355 - -
Gabi1931g00028 364 FunFam GDSL esterase/lipase APG 33 360 - -
Gabi1931g00028 364 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 44 55 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1931g00028 Gabi-Chr1931 242173 245843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1931g00028 17 361 Pollen Coat Proteome AT1G75910 38.968 9.46e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1931g00028 - - gmx:100791290 627.476