Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1931g00022 ATGAAAGGCAATTCAGTTTTCTTGCTATTATTCTACTCTCTCTTGCTGTTTCTTGGAGTGTCAAGATCATCCGCATACATCATTGAAGCAGGGAAGGGTAGTAATGATGACACTACCCCTAATGACAATAGAGTTTATATCGTGTACATGGGAGCCGCAGATTCAACAAATGCTTCCCTTCGGAATGACCATGCTCATATTCTGAGATCAGTGCTAAGAAGGAATAAGAAGGCTCTAGTACGCAACTATAAACATGGTTTCTCAGGGTTCGCAGCTCGTCTATCAAAAGAGGAGGCAAACTCAATTGCTCAGGAACCTGGAGTCGTGTCTGTCTTCCCTGACACCATTTTGAAGCTCCACACAACACGTTCCTGGGATTTCCTCGAGTACCAAACTCACGTCAAAATCGACACCGACCCAAACACGGTCTCCAATTCTTCTACCTCATCAGACATCGTCATTGGCATCTTAGACACAGGCATATGGCCAGAGGCGGCAAGTTTTAGCGACAAGGGTATGGATCCTGTTCCGTCCCGTTGGAAAGGCATCTGCATGAAATCGAAAGACTTCAATTCATCTAACTGTAACAGGAAGTTAATCGGAGCAAGGTATTACTTTGACCCTGATGATGAAGAGGTCAACACTCCAAGGGATACGTTAGGCCATGGGACCCACGTGGCGTCCACGGCGGCGGGGGTCACCGTCACTGATGCATCATACTATGGTCTTGCGGCGGGGAACGCCAAGGGTGGGTCGCCGGAATCCAGATTGGCCGTTTACAGAGTGTGCGGCCGCTCGGGGTGCAGTACCTCCTCCATCCTTGCGGCGTTTGATGATGCGATTGCTGATGGAGTGGACGTGCTATCGCTCTCTCTTGGTTCTCCCGCCGTGATTCGACCCCCATTGACATCCGATCCTGTCGCCATCGGAGCGTTTCACGCCGTGGAGCACGGCATCGTGGTGGTCTGCTCCGCCGGTAATGATGGACCGATGCCACACACGGTTGTCAACGACGCGCCTTGGATTTTAACCGTCGCAGCCACCACCATCGACCGGGATTTTCAGTCTAACGTTGTGTTGGGTGGTAACAAAGTGATCAAGGGCGAATCCATAAATTTCTCCCCACTTTCAAATTCTCCCAAGTATCCATTGATATACGGTGAGTCTGCCAAGACAAGTAAAGCCAGCATAGTTGAAGCAAGAGAATGCCAATCAGATGCATTAGATAGAAATAAAGTCAAAGGGAAGATTGTCCTCTGCGATGGCCAAAGTAATTCAGATTCAACTAGTGATATAGCTGACACGTTGAAAGAGGTGGGAGGATTAGGTCTGGTTCATATCACTGACCAAGATGGAGCAATGATATTGTCTTATGGGGACTTCCCAGCAACAGTGATAAGTCCCAAAGATGCCCCCACAATCCTCCAGTATGTCAATTCAACCAGCAATCCAGTGGCAACAATTCTACCGACAGTATCAGTCATTGATTACAAGCCTGCACCTATGGTGGCATACTTTTCATCAAGAGGGCCTTCAACACTCTCAAGTAATATTCTCAAGCCTGATATAGCAGCACCAGGAGTGGACATTCTTGCAGCATGGATTGACAATGACGAAGAAGATGTTCCAAAAGGAAAAGAGCCCTCTCAATACAACATCGACTCCGGGACTTCCATGTCATGTCCACATGTTTCGGGGCTTGCTGGCAGCGTTAAATCTCGGAACCCCACTTGGAGTGCCTCTGCAATCAAATCAGCAATCATGACCTCAGCAATTCAAAACAACAATTTGAAGGAACCCATGACAACGGATTCAGGGTCGGTAGCCACACCTTATGACTATGGAGCAGGGGAAATGACAACATCAGGACCATTGCAACCAGGGCTAGTTTATGAAACCAGCACCATTGACTACTTGAACTACTTGTGTCACATTGGACTTAATATAACCACGATTAAGGTCATCTCCAGAACTGTCCCTGATAGTTTCAGTTGTCCCAAGGATTCGAGTTCTGATCATATTTCCAACATCAACTACCCTTCCATAGCAATCTCCAACTTCAATGGGAAAGGAGCTGTGAATGTGAGTAGAACTGCTACAAACGTTGGTGAAGAGGATGAAACAGTGTACTCCTCCGTTGTCGATGCTCCCAGTGGGGTAAATGTCAAGTTAATTCCAGATAAACTCCAGTTTACGAAAAGTAGTAAACAACTAAGCTACCAAGTTATTTTCTCCTTGACTTCGACCTCGTCTAAGGCAAATCTGTTTGGATCCATTACCTGGAGTAATGGTAAATATACTGTTCGAAGTCCTTTTGTATTAACCCAGTAG 2331 0.468 MKGNSVFLLLFYSLLLFLGVSRSSAYIIEAGKGSNDDTTPNDNRVYIVYMGAADSTNASLRNDHAHILRSVLRRNKKALVRNYKHGFSGFAARLSKEEANSIAQEPGVVSVFPDTILKLHTTRSWDFLEYQTHVKIDTDPNTVSNSSTSSDIVIGILDTGIWPEAASFSDKGMDPVPSRWKGICMKSKDFNSSNCNRKLIGARYYFDPDDEEVNTPRDTLGHGTHVASTAAGVTVTDASYYGLAAGNAKGGSPESRLAVYRVCGRSGCSTSSILAAFDDAIADGVDVLSLSLGSPAVIRPPLTSDPVAIGAFHAVEHGIVVVCSAGNDGPMPHTVVNDAPWILTVAATTIDRDFQSNVVLGGNKVIKGESINFSPLSNSPKYPLIYGESAKTSKASIVEARECQSDALDRNKVKGKIVLCDGQSNSDSTSDIADTLKEVGGLGLVHITDQDGAMILSYGDFPATVISPKDAPTILQYVNSTSNPVATILPTVSVIDYKPAPMVAYFSSRGPSTLSSNILKPDIAAPGVDILAAWIDNDEEDVPKGKEPSQYNIDSGTSMSCPHVSGLAGSVKSRNPTWSASAIKSAIMTSAIQNNNLKEPMTTDSGSVATPYDYGAGEMTTSGPLQPGLVYETSTIDYLNYLCHIGLNITTIKVISRTVPDSFSCPKDSSSDHISNINYPSIAISNFNGKGAVNVSRTATNVGEEDETVYSSVVDAPSGVNVKLIPDKLQFTKSSKQLSYQVIFSLTSTSSKANLFGSITWSNGKYTVRSPFVLTQ 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1931g00022 776 FunFam subtilisin-like protease SBT1.5 351 495 - -
Gabi1931g00022 776 Pfam Peptidase inhibitor I9 45 120 IPR010259 -
Gabi1931g00022 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 46 773 IPR045051 -
Gabi1931g00022 776 ProSitePatterns Serine proteases, subtilase family, histidine active site. 222 232 IPR022398 -
Gabi1931g00022 776 Pfam Subtilase family 149 617 IPR000209 GO:0006508|GO:0008236
Gabi1931g00022 776 Pfam Fibronectin type-III domain 676 773 IPR041469 -
Gabi1931g00022 776 SUPERFAMILY Subtilisin-like 120 620 IPR036852 GO:0004252|GO:0006508
Gabi1931g00022 776 ProSiteProfiles Serine proteases, subtilase domain profile. 124 625 - -
Gabi1931g00022 776 CDD Peptidases_S8_3 117 592 IPR034197 -
Gabi1931g00022 776 CDD PA_subtilisin_like 357 488 - -
Gabi1931g00022 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Gabi1931g00022 776 FunFam Subtilisin-like protease SBT5.3 34 120 - -
Gabi1931g00022 776 Gene3D Peptidase S8/S53 domain 151 638 IPR036852 GO:0004252|GO:0006508
Gabi1931g00022 776 Gene3D - 351 495 - -
Gabi1931g00022 776 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Gabi1931g00022 776 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Gabi1931g00022 776 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Gabi1931g00022 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 120 IPR037045 -
Gabi1931g00022 776 FunFam Subtilisin-like protease SBT1.5 151 362 - -
Gabi1931g00022 776 Gene3D - 642 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1931g00022 Gabi-Chr1931 143663 148001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1931g00022 46 775 Subtilisin-like Serine Gene Family AT1G20150 54.400 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1931g00022 K25898 - gmx:100820194 1180.62