Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1931g00021 ATGATGGCTTCATCACAGACAAACTTACCCTCACCGTGTCCTTCTTCCTTAGCTCCTAAAACCCCATCCAAAGACACAAAATCCATTGAAGAAGAAGTTTGGAACCATATAAAACTTGATTCTCTTTGTAATCGCTCCATGGACATGGACGCCACCCTATCTTCCACCACCAACACCGCTTGTGCCTCAAGCAACATGATTCTTCACGAGTTTTTGGCTGGATCCCTCAACAAAGACTCATCTACAACCGTATCCACTGCCTGCAATCCTATATTGGTGGCTGATTCTACTTTGCAAACTCAACCAACTTTGCCCAACTTCAGTTCTAGACCTGTCTTTCAGAACCATAGTACTCATAACTCCTCTCTTTCTTCCTTTACAACACGCTCCTCCTGTAGCAAGAAAAGGGTTCGCCAAGATATCTATGTCGACCCCTCTGATCAACGATATAAGCGCATGATGAAGAATCGAGAATCTGCTGTTCGGTCCAAAGCGAGAAAAAAGGCTTATAAAAATGCGTTGGAAATTAAACATGGCCGTTTAACGGAAGAGAATTCTCGTCTGAGAAAACAAGTGGAAGAGTTGCAGCTCTGCTTGTCGTCCTCTGCTAAGCCTCCCAAAATGGGCACTCTGTATAGAACCTCAACATGTCCATTTTAA 660 0.4379 MMASSQTNLPSPCPSSLAPKTPSKDTKSIEEEVWNHIKLDSLCNRSMDMDATLSSTTNTACASSNMILHEFLAGSLNKDSSTTVSTACNPILVADSTLQTQPTLPNFSSRPVFQNHSTHNSSLSSFTTRSSCSKKRVRQDIYVDPSDQRYKRMMKNRESAVRSKARKKAYKNALEIKHGRLTEENSRLRKQVEELQLCLSSSAKPPKMGTLYRTSTCPF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1931g00021 219 CDD bZIP_plant_BZIP46 148 202 - -
Gabi1931g00021 219 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 146 196 IPR004827 GO:0003700|GO:0006355
Gabi1931g00021 219 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 218 IPR043452 GO:0003700|GO:0045893
Gabi1931g00021 219 SUPERFAMILY Leucine zipper domain 148 196 IPR046347 GO:0003700|GO:0006355
Gabi1931g00021 219 SMART brlzneu 144 208 IPR004827 GO:0003700|GO:0006355
Gabi1931g00021 219 MobiDBLite consensus disorder prediction 1 23 - -
Gabi1931g00021 219 MobiDBLite consensus disorder prediction 1 28 - -
Gabi1931g00021 219 Coils Coil 171 191 - -
Gabi1931g00021 219 Pfam Basic region leucine zipper 147 196 IPR004827 GO:0003700|GO:0006355
Gabi1931g00021 219 Gene3D - 147 202 - -
Gabi1931g00021 219 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1931g00021 Gabi-Chr1931 128897 130804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1931g00021 102 219 bZIP Transcription Factor Family AT3G56850 41.935 3.61e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi1931g00021 bZIP_1 4.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1931g00021 K14432 - lja:Lj1g3v2216450.1 116.316