Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi192g00007 ATGGCCACCACTGTCCCTATTAACTCACGTGTTTCACGCATGCATTACTACACCACTGACGATGAGGAAGACAACGACGACGTTAGGGACAGCGACCTAGACGACGAGTACGAGGACGACAACAATGTTAACGGCGAGGAGGAAAAATTAGAACCCAACAAGATGGTTGGTAACGGGAAGTGTTGGTCTGGCGGCGGTTCCCGGCGAGAAGGTTGGTCTCTGGGTCGGGTTCTGTTGGACCCGAAAGCGAAATGGGTTCAAGAATGGAACCGGATATTCCTGCTGGTTTGCGCGACCGGGTTATTCGTGGACCCGCTATTCTTCTACACGCTCTCCATAAGCGACACGTGTATGTGTCTCTTCGTCGATGGGTGGTTCGTCATCACCGTCACGGTGCTCCGGTGCATGACGGACACGTTGCACCTCTGGAACATGTGGTTGCAACTACAGATGGCAAAACGCTCCATCAGAGACACTGCCACAACCACCACACGTGGCTCTTTTGCTCTTCATTACCTTAAGGCCAAAAAGGGCTTCTTCTTTGACCTCTTTCTCATCCTTCCTCTGCCCCAGATTGTGCTATGGGTGGCAATTCCCTCTCTGTTGGAGAAAGGATCAATTACATCGGTGATGACAGTGTTCTTAATCATGTTCCTCTTTCAATACCTTCCCAAAATTTTTCACTCAGTTTGCCTCTTGCGTAGCATGCAATACGTCTCTGGGTACATTTTTGGAACCGTTTGGTGGGGTTTCGCCCTCAACATGATCGCGTATTTTGTGGCTTCCCATGCAGCAGGGTCATGTTGGTACTTGCTGGGGATCCAAAGGGCAGCGAAGTGCCTCGAAGAGCAATGTGGGAAAACAAGTGGTTGTGGCCTGAAAACGCTGTGTTGTAAAGAACCTATATACTATGGAACCACTAGCATGGTGAGAGACAAAACAAGGTTGGCATGGGCAGAGAATAGGGAAGCAAGGTCTACGTGCTTAGATAGCCCTGATAACTACGACTATGGAGTTTATAAATGGACTGTTCAACTTGTAACAAATGATAGCCGATTGGAAAAGATACTTTTACCTATCTTCTGGGGCCTAATGACTCTAAGCACTTTTGGGAACCTAGAGAGTACAACCGAACGCATAGAAGTGATTTTCAACATTATAGTATTGACTAGTGGCCTTCTTCTAGTCACTATGCTGATCGGAAACATTAAGGTGTTTTTACATGCAACAACATCAAAGAAGCAAGCGATGCAATTGAAGATGAGGAACATTGAATGGTGGATGAGCAAAAGGCGCTTGCCACAAGGATTCCGGCAGCGTGTCCGTAACTACGAGCGGCAACATTGGGCTGCCATGCGTGGGGTCGATGAATTCCAATTGACAAAAAATCTCCCTGAGGGACTAAGAAGGGACATCAAGTACCATCTCTGTTTGGATTTGGTGAGACAGGTGCCACTATTTCAGCATATGGATGATTTGGTGCTAGAGAACATTTGTGACCGTGTGAAGTCCCTTGTATTCACAAAGGGAGAAACTATAACAAGAGAGGGAGACCCAGTTCAAAGAATGCTATTTGTGGTAAGGGGTCACCTTCAGAGCAGCCAAGTCCTACGTGAGGGGGTGAAAAGTTGCTGCATGTTAGGCCCAGGGAACTTCAGTGGGGACGAGCTACTTTCATGGTGTCTTAGAAGGCCTTTTATAGAACGCCTTCCAGCATCTTCATCCACTTTGGTCACACTTGAGACCACTGAGGCATTTGGGCTTGAAGCAGAGGATGTGAAGTATGTGACCCAACATTTTAGGTACACTTTTGTGAAGGAAAAGGTTAAGAGAAGTGCCAGGTATTACTCACCTGGTTGGAGAACTTGGGCTGCTGTGGCCATTCAATTGGCTTGGAGAAGCTATAAGCACCGTTTGACTTTGACATCTTTGTCCTTTATAAGGCCTCGTAGGCCTGTGTCAAGGTGCACTTCTAGGGAAGAGGACAGGCTTCGTCTCTATACAGCTTTGTTAACCTCACCAAAGCCTAATCAAGATGATTTTGACTTTTGA 2052 0.4717 MATTVPINSRVSRMHYYTTDDEEDNDDVRDSDLDDEYEDDNNVNGEEEKLEPNKMVGNGKCWSGGGSRREGWSLGRVLLDPKAKWVQEWNRIFLLVCATGLFVDPLFFYTLSISDTCMCLFVDGWFVITVTVLRCMTDTLHLWNMWLQLQMAKRSIRDTATTTTRGSFALHYLKAKKGFFFDLFLILPLPQIVLWVAIPSLLEKGSITSVMTVFLIMFLFQYLPKIFHSVCLLRSMQYVSGYIFGTVWWGFALNMIAYFVASHAAGSCWYLLGIQRAAKCLEEQCGKTSGCGLKTLCCKEPIYYGTTSMVRDKTRLAWAENREARSTCLDSPDNYDYGVYKWTVQLVTNDSRLEKILLPIFWGLMTLSTFGNLESTTERIEVIFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMSKRRLPQGFRQRVRNYERQHWAAMRGVDEFQLTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVQRMLFVVRGHLQSSQVLREGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPASSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRSYKHRLTLTSLSFIRPRRPVSRCTSREEDRLRLYTALLTSPKPNQDDFDF 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi192g00007 683 Gene3D Helix hairpin bin 411 477 - -
Gabi192g00007 683 MobiDBLite consensus disorder prediction 15 45 - -
Gabi192g00007 683 FunFam cyclic nucleotide-gated ion channel 4 484 602 - -
Gabi192g00007 683 SUPERFAMILY cAMP-binding domain-like 412 600 IPR018490 -
Gabi192g00007 683 FunFam Cyclic nucleotide-gated ion channel 1 413 477 - -
Gabi192g00007 683 SUPERFAMILY Voltage-gated potassium channels 84 406 - -
Gabi192g00007 683 Gene3D Jelly Rolls 484 602 IPR014710 -
Gabi192g00007 683 ProSiteProfiles cAMP/cGMP binding motif profile. 486 565 IPR000595 -
Gabi192g00007 683 CDD CAP_ED 486 592 IPR000595 -
Gabi192g00007 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 69 648 - -
Gabi192g00007 683 MobiDBLite consensus disorder prediction 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi192g00007 Gabi-Chr192 83144 92668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi192g00007 66 682 Ion Channels AT5G54250 77.760 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi192g00007 K05391 - zju:107430493 1108.2