Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1929g00038 ATGGTTGAGTATCGAAGGCTGCTACTGCTGCTGTTCATCAGCACCTGCATTCTTCGTTTGATGCCCGATGGTGTCACTGCCACAGATCCAAATGATGCTGCTGCTGTAAGGGCTATGTTTCAAAGTATGAACTCACCATCTCAGCTAGGTTGGCCTGCTAATGGTGATGATCCGTGTGGACAATCTTGGAAAGGCATTACTTGCTCAGGCAACCGTGTTACAGAGATTGAGTTATCTAATCTTGGACTAACTGGAACATTGGCTTACGGATTACAAGCCTTGACATCTGTGACCAAACTAGACATGAGTGACAACAATCTTGTAGGAGCCATACCATACCAACTTCCTCCTAATGTGCAGCTTTTAAATCTTGCTAGTAATAACTTCACTGGAACAGTCCCCTACTCTATTTCTAATTTGACCTCTCTTACAGACCTGAATCTTGGTCACAATCAGCTCCAGCAAGGACTGGGTGTCGACTTTCAAAATCTTTCTACACTCTCTATATTGGATCTCTCTTTCAATTTTCTGACTGGTGACCTCCCTCAGACTTTGAGCTCACTTTCAGGAATAACCACTATGTATCTACAAAACAACCAGTTTACAGGCACTATCGATGTCCTTGCTAATCTGCCTCTGGATAATCTGAATGTGGAAAACAATAATTTTACAGGCTGGATACCAGAACAATTGAAAAAGATAAACCTACAGACCGGTGGTAATGCATGGAGCTCAGGACCTGCACCCCCACTTCCTCCTGGGACACCTCCAGCACCTAAAAGCAAGCAACACCACAAATCTGGTGGTGGAAGTGCTACCCCCTCAGATGCTGGCAGTGGCACAGTTGGTGATGGCAAAAAATCTGGTATAGGAGGTGGTGGCATAGCTGGAATTTTGATCTCCGTCATTGTTGTTGGGGCAGTAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATCCAGAAAAGCTGGAAAATCAGTCCTTTCCCCCTCTTCCTTCAAATGAAGTGCATGAAGTGAAGTCTGTGCAAACTTCCTCTGTAATTGACTTGAAGACGTTTGATACTTCTGCCACAATAAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTTGATGACAATGAATTCTCAAAGAAGCCCACTCTTGTCAAGAAGACTGTAACAGCTCCTGCAAATGTGAAATCATATTCTATAGCTGATCTGCAGATTGCCACTGGCAGCTTCAGTGTGGATCACCTTGTTGGTGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGATGATGGAAAGGTTCTGGCAGTGAAGAAGATAGATTCATCTGTCATTCCCAATGATTTGTCGGAAGATTTTACAGAAATAGTTTCAAACATCTCCCATTTACATCATCCAAATGTGACAGAGCTTGTAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTTCTTTAGAGTACCTACATGAAGTTTGTTCGCCGTCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTACTTGATGCAGAGCTTAACCCTCATCTTTCAGACAGTGGATTGGCAAGCAATATTCCAAATGCAGACCAGATATTGAACCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACTCTGAAAAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTCAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGATCCGAGCAATCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTGAAAGGGTTATATCCTGTTAAATCTCTTTCTCGTTTTGCCGATGTTATTGCTCTCTGCGTTCAGCCGGAGCCTGAGTTCCGACCACCAATGTCAGAGGTGGTTCAAGCACTTGTACGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTGGAAGTGGAAATGATCTTGGAGGAGGATCCCAACGAGGGAGTGATGACCCGTCTATACGAGACATCTAA 2085 0.4355 MVEYRRLLLLLFISTCILRLMPDGVTATDPNDAAAVRAMFQSMNSPSQLGWPANGDDPCGQSWKGITCSGNRVTEIELSNLGLTGTLAYGLQALTSVTKLDMSDNNLVGAIPYQLPPNVQLLNLASNNFTGTVPYSISNLTSLTDLNLGHNQLQQGLGVDFQNLSTLSILDLSFNFLTGDLPQTLSSLSGITTMYLQNNQFTGTIDVLANLPLDNLNVENNNFTGWIPEQLKKINLQTGGNAWSSGPAPPLPPGTPPAPKSKQHHKSGGGSATPSDAGSGTVGDGKKSGIGGGGIAGILISVIVVGAVVAFFLVKRKSKKSSSDPEKLENQSFPPLPSNEVHEVKSVQTSSVIDLKTFDTSATINLKPPPIDRHKSFDDNEFSKKPTLVKKTVTAPANVKSYSIADLQIATGSFSVDHLVGEGSFGRVYRAQFDDGKVLAVKKIDSSVIPNDLSEDFTEIVSNISHLHHPNVTELVDEYSKPLIWNSRVKIALGTARSLEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASNIPNADQILNHNVGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGSGNDLGGGSQRGSDDPSIRDI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1929g00038 694 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Gabi1929g00038 694 Pfam Protein kinase domain 490 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1929g00038 694 SUPERFAMILY Protein kinase-like (PK-like) 396 658 IPR011009 -
Gabi1929g00038 694 Gene3D Ribonuclease Inhibitor 29 249 IPR032675 -
Gabi1929g00038 694 MobiDBLite consensus disorder prediction 238 285 - -
Gabi1929g00038 694 SUPERFAMILY L domain-like 28 231 - -
Gabi1929g00038 694 MobiDBLite consensus disorder prediction 327 341 - -
Gabi1929g00038 694 MobiDBLite consensus disorder prediction 670 694 - -
Gabi1929g00038 694 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 254 - -
Gabi1929g00038 694 ProSiteProfiles Protein kinase domain profile. 414 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1929g00038 694 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 466 672 - -
Gabi1929g00038 694 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 479 - -
Gabi1929g00038 694 MobiDBLite consensus disorder prediction 320 341 - -
Gabi1929g00038 694 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Gabi1929g00038 694 Gene3D Transferase(Phosphotransferase) domain 1 477 675 - -
Gabi1929g00038 694 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 662 IPR046959 -
Gabi1929g00038 694 Gene3D Phosphorylase Kinase; domain 1 376 476 - -
Gabi1929g00038 694 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1929g00038 Gabi-Chr1929 267434 274745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1929g00038 1 671 Strubbelig Receptor Gene Family AT3G14350 66.176 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gabi1929g00038 Pkinase 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1929g00038 - - gmx:100807707 1118.61