Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1929g00029 ATGGCTTCCGCTTGTGCTTCCACTGCCATTGCAGCAGTTGCCATCTCTACACCAAGGCAAGTTTCGAATGCATACAGTTCCCAGAAGAATGGATCACCCTTGGGAACCCCAAAAGCTTCTTTTCTTAGTGGGAGGAAATTGAGGGTGAATAAGTACACAGCACCAGTTAGAGGACGATCCAGTACTACAGAGTGTGCAGCAGCTGACGTTGACAGGCCTCTATGGTTTCCAGGAAGCACCCCTCCTCCATGGCTTGATGGCAGTCTCCCAGGAGACTTTGGGTTTGATCCTCTAGGTCTTGGATCTGATCCTGAGAGTCTGAGATGGAATGTTCAGGCAGAGCTTGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATTCCAGAATTCCTAACAAAGATTGGTATCTTAAACACACCTTCATGGTACACAGCTGGAGAACAGGAATACTTCACGGACACCACTACCCTCTTCATAGTTGAGCTCATTTTCATTGGCTGGGCTGAGGGTAGAAGGTGGGCTGACATAATCAAACCAGGGTGTGTTAACACTGACCCTATCTTCCCCAACAACAAGCTCACAGGGACTGATGTTGGTTACCCAGGTGGTCTTTGGTTTGACCCACTTGGATGGGGAAGTGGTTCTCCTGAGAAGCTCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCAATGTTGGCTGTAATGGGTGCATGGTTCCAGCACATTTACACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGCCATGCTACCATTTTTGCTGCTTTTACCCCCAAGTGA 834 0.4892 MASACASTAIAAVAISTPRQVSNAYSSQKNGSPLGTPKASFLSGRKLRVNKYTAPVRGRSSTTECAAADVDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1929g00029 277 Gene3D Chlorophyll a/b binding protein domain 82 267 - -
Gabi1929g00029 277 SUPERFAMILY Chlorophyll a-b binding protein 68 275 - -
Gabi1929g00029 277 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 275 IPR001344 GO:0009765|GO:0016020
Gabi1929g00029 277 FunFam Chlorophyll a-b binding protein, chloroplastic 82 267 - -
Gabi1929g00029 277 Pfam Chlorophyll A-B binding protein 81 247 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1929g00029 Gabi-Chr1929 182620 184179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1929g00029 53 277 Chloroplast and Mitochondria Gene Families AT3G61470 88.938 4.31e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1929g00029 K08908 - gmx:100784089 517.309