Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1929g00016 ATGTGGGTTCTCGAATGCTGGATCAATCTCTCAGGATTCCAAAGAACGATCAACTTCAATGCGAAAGCTTATGCAGCCCATTTGCTTTCAGATGTTGCAGCATTCGCCATCTCTATATTTTCTTTATGGGCTGCTGGTTGGGAAGCCAATCCTCGTCAATCATATGGATTTTTCAGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAGTTAATATGGTTGCTTGCTGGGATTCTGGTATACGAAGCCATTGAAAGAATTGTAGCTGGGACTCATGAGGTGAATGGCTTTTTAATGTTTATAGTTGCTGCATTTGGTCTAGTGGTTAACATCATCATGGCTCTGTTATTGGGTCATGATCATGGCCATGGACATAATGATCATGGCCACAGCCATGGACTTCAAGTGTCTACTCATCACCATCATCATGATGTCAATCATCCAAAAGATTGCCACCATCATGCTCATGAAGATCACATGCACCATGATGCTCACGAGGTTGCTAAACCGCTTCTTGGTGAATCAAAAAAGAAGGAGAGGAGATGGAACATAAATGTACAGGGTGCTTATCTCCATGTACTTGGGGACTCTATCCAGAGTGTTGGAGTAATGGTTGGGGGAGCAATCATATGGTATAAGCCTGATTGGCAATTAGTTGATTTAATTTGCACTTTAATATTTTCAGTAATTGTTTTGGGGACAACAATAAATATGCTGCGAAACATATTGGAAGTCCTAATGGAGAGCACACCACGTGAGATAGATGCAGCCAAGCTTGAAAGGGGGCTGCTGGACATGGAAGAAGTAGTGGCTGTTCATGAGTTGCATATATGGGCTATTACAGTTGGCAAGGTTTTACTGGCTTGTCATGTTAAAATCAGACCAGAAGCGAATGCAGACATGGTGCTGGACAAAGTTATAGACTATATCAGAAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 978 0.4172 MWVLECWINLSGFQRTINFNAKAYAAHLLSDVAAFAISIFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIERIVAGTHEVNGFLMFIVAAFGLVVNIIMALLLGHDHGHGHNDHGHSHGLQVSTHHHHHDVNHPKDCHHHAHEDHMHHDAHEVAKPLLGESKKKERRWNINVQGAYLHVLGDSIQSVGVMVGGAIIWYKPDWQLVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDAAKLERGLLDMEEVVAVHELHIWAITVGKVLLACHVKIRPEANADMVLDKVIDYIRRVYNISHVTIQIER 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1929g00016 325 NCBIfam cation diffusion facilitator family transporter 25 325 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Gabi1929g00016 325 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 253 324 IPR036837 -
Gabi1929g00016 325 Gene3D Cation efflux protein transmembrane domain 21 246 IPR027469 -
Gabi1929g00016 325 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 25 325 - -
Gabi1929g00016 325 MobiDBLite consensus disorder prediction 126 154 - -
Gabi1929g00016 325 SUPERFAMILY Cation efflux protein transmembrane domain-like 23 248 IPR027469 -
Gabi1929g00016 325 Pfam Cation efflux family 23 247 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1929g00016 Gabi-Chr1929 40528 43977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1929g00016 25 325 Inorganic Solute Cotransporters AT2G46800 72.727 3.99e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1929g00016 K14689 - gmx:100790458 467.618