Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1929g00015 ATGCAAGCCAAAGCTCAAAGCCAAATGGAAGCACAAAGCTCTAAGCACGCACAAATTATTGAAATCAGTGGAGAACTTCCTCCGGGAGGAGGTATGATTTGTGGGGAAGCACCATGTGGGTTCTCGAATGCTGGATCAATCTCTCAGGATTCCAAAGAACGATCAACTTCAATGCGAAAGCTTGTGATGGCAGTGGTTCTTTGTGTTATTTTCATGAGCATTGAAGTAGTTGGTGGCATTAAAGCTAATAGCCTTTCAATTTTGACAGATGCAGCCCATTTGCTTTCAGATGTTGCAGCATTCGCCATCTCTATATTTTCTTTATGGGCTGCTGGTTGGGAAGCCAATCCTCGTCAATCATATGGATTTTTCAGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAGTTAATATGGTTGCTTGCTGGGATTCTGGTATACGAAGCCATTGAAAGAATTGTAGCTGGGACTCATGAGGTGAATGGCTTTTTAATGTTTATAGTTGCTGCATTTGGTCTAGTGGTTAACATCATCATGGCTCTGTTATTGGGTCATGATCATGGCCATGGACATAATGATCATGGCCACAGCCATGGACTTCAAGTGTCTACTCATCACCATCATCATGATGTCAATCATCCAAAAGATTGCCACCATCATGCTCATGAAGATCACATGCACCATGATGCTCACGAGGTTGCTAAACCGCTTCTTGGTGAATCAAAAAAGAAGGAGAGGAGATGGAACATAAATGTACAGGGTGCTTATCTCCATGTACTTGGGGACTCTATCCAGAGTGTTGGAGTAATGGTTGGGGGAGCAATCATATGGTATAAGCCTGATTGGCAATTAGTTGATTTAATTTGCACTTTAATATTTTCAGTAATTGTTTTGGGGACAACAATAAATATGCTGCGAAACATATTGGAAGTCCTAATGGAGAGCACACCACGTGAGATAGATGCAGCCAAGCTTGAAAGGGGGCTGCTGGACATGGAAGAAGTAGTGGCTGTTCATGAGTTGCATATATGGGCTATTACAGTTGGCAAGGTTTTACTGGCTTGTCATGTTAAAATCAGACCAGAAGCGAATGCAGACATGGTGCTGGACAAAGTTATAGACTATATCAGAAGGGTTTATAACATCAGTCATGTAACTATACAGATAGAGCGCTAG 1176 0.4192 MQAKAQSQMEAQSSKHAQIIEISGELPPGGGMICGEAPCGFSNAGSISQDSKERSTSMRKLVMAVVLCVIFMSIEVVGGIKANSLSILTDAAHLLSDVAAFAISIFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIERIVAGTHEVNGFLMFIVAAFGLVVNIIMALLLGHDHGHGHNDHGHSHGLQVSTHHHHHDVNHPKDCHHHAHEDHMHHDAHEVAKPLLGESKKKERRWNINVQGAYLHVLGDSIQSVGVMVGGAIIWYKPDWQLVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDAAKLERGLLDMEEVVAVHELHIWAITVGKVLLACHVKIRPEANADMVLDKVIDYIRRVYNISHVTIQIER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1929g00015 391 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 319 390 IPR036837 -
Gabi1929g00015 391 Gene3D Cation efflux protein transmembrane domain 57 312 IPR027469 -
Gabi1929g00015 391 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 10 391 - -
Gabi1929g00015 391 MobiDBLite consensus disorder prediction 192 220 - -
Gabi1929g00015 391 Pfam Cation efflux family 61 313 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Gabi1929g00015 391 NCBIfam cation diffusion facilitator family transporter 58 391 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Gabi1929g00015 391 SUPERFAMILY Cation efflux protein transmembrane domain-like 55 314 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1929g00015 Gabi-Chr1929 40190 43977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1929g00015 9 391 Inorganic Solute Cotransporters AT2G46800 67.980 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1929g00015 K14689 - gmx:100790458 599.356