Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1929g00014 ATGAGTTGTTTGAAAATGGCGGCGGTCTTGAGCTGTGACAAGGGGATGATGGGGGATCATAGCAACGAGCACCACAATGACTCCGCGGAGAAGTTTCTGCTCAGAGTGTTGCTTGTTGAATCTGATGATTCTACTCGCCAGATTATCTCTGCTCTTCTCCGCAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGCTTAAAGGCATGGGAGACGTTGAAGAAAAAGGCACCTGACATAGATCTCATATTAACTGAAGTGGAGTTGCCATCAATATCTGGATTTTCACTTCTCACTTTAATCATGGAGCATGACATTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCAGTTAGCATGGTGTACAAATGCATGTTAAAAGGTGCAGCTGATTTTCTTATAAAACCCATTCGGAGGAATGAGCTAAGGAACTTATGGCAGCATGTATGGAGAAGGCATGCTATTAGCAGGACTCCTCAAAAGTTAACATTGCCCCAGAATAAACTTGAAGTTACTGCAGAGAACAATGCTGCAAGCAATAATTCTAGTGGTTCTGTGGCTTTCACACAGAAAAATAACGAATGCAGCGAGAAAACAAGTGAGGCACAAAGCACTTGTACATCGCCATTTTTGGAAGCTGAGGGTGCATACATGGAAAATATGCAGGATACCTCCCAGCTGAAGAGTTCTTCCAATTTCAGCAAGATTGACACAGGGAAGTACGAAGAGTATACCAATTTTGGATGGGAATCAGCTAAGCATAACAGTGAAGCTGGAGAGAAATCAATTGTATTTGTATCAGAAGCTGCAAGGTGCAACAAAAGTTGTAAATCAACAAGTTTAAGGCTAGGTCAAGGCTATGATTATAGTGAAACAGAAAACCAAGATGAAGTTGTAAGAATAGAGTTAAGCAAAGCCAATCTTCACATTAGTACAGAGATTCATGGATGCATTGATGACCTGGTAGAACCTTCTACTGGGGCTATTGATTTGATTGCTACATTTGAGAATCTTCCAAAGAGCACTGATGAAAATCGTAGTTTCAATGGTGATAACACAGCCAAGTTTGATTTCGATACACAATTGGGACTTTCTATACGTAGTGATTTTACTGGTAGCTCATGTAAACCTGCAAATGAGGAAAGACAAATATTGAACCATTCAAATGCTTCTGCTTTTTCTTGGTATGGCAGTAGTAAGTTGTTGCAGCCCCTTTTTCCAACATCATCAATTACTTCTGCTAAATTAACAAACACCAGTTGGAATTCTCATGAATCCCATGAATTATCTGAAAATATAAATACTTCTCATCCGTATGGTGGCAAAAATCATTATCAGGAGAATATGACCTCCTCTGTGGTCATTGATCAGTCTGGAAATGCTGAACCAAATTTCCCAAACAGTCAACTTGGATTTTTTCCTGATACTGGGGTTACTTCTGATCATAAGTCTGTGGGACATGGTAATGTTTTCCCTTCTATTCCGTACGCACAATCAGGTTGCTATCCCATATGGACTCCGAAACCATTGTGCCAGAAAGAGAGTTCTCCATTTCCCGCTTGTACTTCATCCCAGTCCAATCCTGAAAGTCACGACTCCGAACGTTATCACTGGTCGGATGATGCCACCTATACTTGTGATCAAAATGTAAATGATCAACGCAATTTGGATTGTGTGACACATGACGCTCCTGCTGCTGGTCAGAGTTCTGGTACTAGTTTTTACCATGATGTGGCAAATCATAATAGTAGTGGTGTATATGAAAGCATAGGCAGCGGGAGTGATGGAAATGCTACTTCAGCTGTGGTGTCCAAGAATATCCCTGAAAGTTTTATTGATAGTGGTCGTAATAGTTATGATGAATTCAGGACGACAAATTCTCATCAGTCCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGACTGAAGCGGAAAGACAGATGTTATGAGAAAAAGGTACTACAACCATTCTATTACTGCTTCTATAAAGAACTACTCAAACTATTTATGGTAAATGTACAATTGGGGCCTTATGCAAGTAATTGA 2055 0.4024 MSCLKMAAVLSCDKGMMGDHSNEHHNDSAEKFLLRVLLVESDDSTRQIISALLRKCSYKVAAVPDGLKAWETLKKKAPDIDLILTEVELPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVYKCMLKGAADFLIKPIRRNELRNLWQHVWRRHAISRTPQKLTLPQNKLEVTAENNAASNNSSGSVAFTQKNNECSEKTSEAQSTCTSPFLEAEGAYMENMQDTSQLKSSSNFSKIDTGKYEEYTNFGWESAKHNSEAGEKSIVFVSEAARCNKSCKSTSLRLGQGYDYSETENQDEVVRIELSKANLHISTEIHGCIDDLVEPSTGAIDLIATFENLPKSTDENRSFNGDNTAKFDFDTQLGLSIRSDFTGSSCKPANEERQILNHSNASAFSWYGSSKLLQPLFPTSSITSAKLTNTSWNSHESHELSENINTSHPYGGKNHYQENMTSSVVIDQSGNAEPNFPNSQLGFFPDTGVTSDHKSVGHGNVFPSIPYAQSGCYPIWTPKPLCQKESSPFPACTSSQSNPESHDSERYHWSDDATYTCDQNVNDQRNLDCVTHDAPAAGQSSGTSFYHDVANHNSSGVYESIGSGSDGNATSAVVSKNIPESFIDSGRNSYDEFRTTNSHQSSQREAALTKFRLKRKDRCYEKKVLQPFYYCFYKELLKLFMVNVQLGPYASN 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1929g00014 684 ProSiteProfiles Response regulatory domain profile. 35 153 IPR001789 GO:0000160
Gabi1929g00014 684 Pfam Response regulator receiver domain 36 147 IPR001789 GO:0000160
Gabi1929g00014 684 SUPERFAMILY CheY-like 34 163 IPR011006 -
Gabi1929g00014 684 CDD psREC_PRR 36 139 - -
Gabi1929g00014 684 Gene3D - 34 241 - -
Gabi1929g00014 684 MobiDBLite consensus disorder prediction 519 538 - -
Gabi1929g00014 684 PANTHER TWO-COMPONENT RESPONSE REGULATOR 35 203 IPR045279 GO:0009736
Gabi1929g00014 684 SMART REC_2 34 149 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1929g00014 Gabi-Chr1929 29331 33893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1929g00014 631 656 Response Regulator Gene Family AT5G24470 88.462 2.35e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi1929g00014 Response_reg 2.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1929g00014 K12130 - gmx:100779346 908.286