Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1929g00013 ATGAGTTGTTTGAAAATGGCGGCGGTCTTGAGCTGTGACAAGGGGATGATGGGGGATCATAGCAACGAGCACCACAATGACTCCGCGGAGAAGTTTCTGCTCAGAGTGTTGCTTGTTGAATCTGATGATTCTACTCGCCAGATTATCTCTGCTCTTCTCCGCAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGCTTAAAGGCATGGGAGACGTTGAAGAAAAAGGCACCTGACATAGATCTCATATTAACTGAAGTGGAGTTGCCATCAATATCTGGATTTTCACTTCTCACTTTAATCATGGAGCATGACATTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCAGTTAGCATGGTGTACAAATGCATGTTAAAAGGTGCAGCTGATTTTCTTATAAAACCCATTCGGAGGAATGAGCTAAGGAACTTATGGCAGCATGTATGGAGAAGGCATGCTATTAGCAGGACTCCTCAAAAGTTAACATTGCCCCAGAATAAACTTGAAGTTACTGCAGAGAACAATGCTGCAAGCAATAATTCTAGTGGTTCTGTGGCTTTCACACAGAAAAATAACGAATGCAGCGAGAAAACAAGTGAGGCACAAGATACCTCCCAGCTGAAGAGTTCTTCCAATTTCAGCAAGATTGACACAGGGAAGTACGAAGAGTATACCAATTTTGGATGGGAATCAGCTAAGCATAACAGTGAAGCTGGAGAGAAATCAATTGTATTTGTATCAGAAGCTGCAAGGTGCAACAAAAGTTGTAAATCAACAAGTTTAAGGCTAGGTCAAGGCTATGATTATAGTGAAACAGAAAACCAAGATGAAGTTGTAAGAATAGAGTTAAGCAAAGCCAATCTTCACATTAGTACAGAGATTCATGGATGCATTGATGACCTGGTAGAACCTTCTACTGGGGCTATTGATTTGATTGCTACATTTGAGAATCTTCCAAAGAGCACTGATGAAAATCGTAGTTTCAATGGTGATAACACAGCCAAGTTTGATTTCGATACACAATTGGGACTTTCTATACGTAGTGATTTTACTGGTAGCTCATGTAAACCTGCAAATGAGGAAAGACAAATATTGAACCATTCAAATGCTTCTGCTTTTTCTTGGTATGGCAGTAGTAAGTTGTTGCAGCCCCTTTTTCCAACATCATCAATTACTTCTGCTAAATTAACAAACACCAGTTGGAATTCTCATGAATCCCATGAATTATCTGAAAATATAAATACTTCTCATCCGTATGGTGGCAAAAATCATTATCAGGAGAATATGACCTCCTCTGTGGTCATTGATCAGTCTGGAAATGCTGAACCAAATTTCCCAAACAGTCAACTTGGATTTTTTCCTGATACTGGGGTTACTTCTGATCATAAGTCTGTGGGACATGGTAATGTTTTCCCTTCTATTCCGTACGCACAATCAGGTTGCTATCCCATATGGACTCCGAAACCATTGTGCCAGAAAGAGAGTTCTCCATTTCCCGCTTGTACTTCATCCCAGTCCAATCCTGAAAGTCACGACTCCGAACGTTATCACTGGTCGGATGATGCCACCTATACTTGTGATCAAAATGTAAATGATCAACGCAATTTGGATTGTGTGACACATGACGCTCCTGCTGCTGGTCAGAGTTCTGGTACTAGTTTTTACCATGATGTGGCAAATCATAATAGTAGTGGTGTATATGAAAGCATAGGCAGCGGGAGTGATGGAAATGCTACTTCAGCTGTGGTGTCCAAGAATATCCCTGAAAGTTTTATTGATAGTGGTCGTAATAGTTATGATGAATTCAGGACGACAAATTCTCATCAGTCCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGACTGAAGCGGAAAGACAGATGTTATGAGAAAAAGGTACTACAACCATTCTATTACTGCTTCTATAAAGAACTACTCAAACTATTTATGGTAAATGTACAATTGGGGCCTTATGCAAGTAATTGA 1998 0.4014 MSCLKMAAVLSCDKGMMGDHSNEHHNDSAEKFLLRVLLVESDDSTRQIISALLRKCSYKVAAVPDGLKAWETLKKKAPDIDLILTEVELPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVYKCMLKGAADFLIKPIRRNELRNLWQHVWRRHAISRTPQKLTLPQNKLEVTAENNAASNNSSGSVAFTQKNNECSEKTSEAQDTSQLKSSSNFSKIDTGKYEEYTNFGWESAKHNSEAGEKSIVFVSEAARCNKSCKSTSLRLGQGYDYSETENQDEVVRIELSKANLHISTEIHGCIDDLVEPSTGAIDLIATFENLPKSTDENRSFNGDNTAKFDFDTQLGLSIRSDFTGSSCKPANEERQILNHSNASAFSWYGSSKLLQPLFPTSSITSAKLTNTSWNSHESHELSENINTSHPYGGKNHYQENMTSSVVIDQSGNAEPNFPNSQLGFFPDTGVTSDHKSVGHGNVFPSIPYAQSGCYPIWTPKPLCQKESSPFPACTSSQSNPESHDSERYHWSDDATYTCDQNVNDQRNLDCVTHDAPAAGQSSGTSFYHDVANHNSSGVYESIGSGSDGNATSAVVSKNIPESFIDSGRNSYDEFRTTNSHQSSQREAALTKFRLKRKDRCYEKKVLQPFYYCFYKELLKLFMVNVQLGPYASN 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1929g00013 665 MobiDBLite consensus disorder prediction 500 519 - -
Gabi1929g00013 665 SUPERFAMILY CheY-like 34 163 IPR011006 -
Gabi1929g00013 665 Gene3D - 34 229 - -
Gabi1929g00013 665 ProSiteProfiles Response regulatory domain profile. 35 153 IPR001789 GO:0000160
Gabi1929g00013 665 Pfam Response regulator receiver domain 36 147 IPR001789 GO:0000160
Gabi1929g00013 665 CDD psREC_PRR 36 139 - -
Gabi1929g00013 665 MobiDBLite consensus disorder prediction 178 216 - -
Gabi1929g00013 665 PANTHER TWO-COMPONENT RESPONSE REGULATOR 35 324 IPR045279 GO:0009736
Gabi1929g00013 665 SMART REC_2 34 149 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1929g00013 Gabi-Chr1929 29331 33896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1929g00013 612 637 Response Regulator Gene Family AT5G24470 88.462 2.26e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi1929g00013 Response_reg 2.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1929g00013 K12130 - gmx:100779346 862.833