Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1926g00004 ATGCCTTCAGCTGTTGTGGGGACAGTACGCTCATTGGAGCGTGACTCTAATGCCTGCAAGGTTGCAAGAGCGGGAGATAACGTAGCTGTAACATTGCTAGGTGTAGATGGAAGTCGTGTAATGGCAGGAGGTGTACTATCCCATCCTGACTTTCCTGTCACAGTTGCAAAGCATTTGGAGTTGAAAGTACTTCTCTTGGATGGTGCAAGTCCCTTATTGGGGGGCTCTCAGTTAGAGTTTCATATACACCATGCAAAGGAACCTGCTAGAGTTTCAAAAATATTGTCAGTACTTGATCCCAAGACTGGTAAGGTAACCAAAAAGTCCCCACGCTGTCTTACTGCAAAGCAAAGTGCAGTAATTGAGGTGATTTTGCACGAGACAGTCTGTGTAGTAGAGTTCTCTAGTTGCAAAGCACTTGGAAGGGTGTCCTTAAGATCATTAAGAAGAACAATTGCTGTTGGACTTGTGACAACAATTATTGAAGATGAAAATTAG 498 0.4378 MPSAVVGTVRSLERDSNACKVARAGDNVAVTLLGVDGSRVMAGGVLSHPDFPVTVAKHLELKVLLLDGASPLLGGSQLEFHIHHAKEPARVSKILSVLDPKTGKVTKKSPRCLTAKQSAVIEVILHETVCVVEFSSCKALGRVSLRSLRRTIAVGLVTTIIEDEN 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1926g00004 165 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 57 161 IPR009001 -
Gabi1926g00004 165 Gene3D Translation factors 55 165 - -
Gabi1926g00004 165 Pfam Elongation factor Tu C-terminal domain 55 160 IPR004160 -
Gabi1926g00004 165 PANTHER TRANSLATION FACTOR 1 160 - -
Gabi1926g00004 165 Gene3D Translation factors 1 49 - -
Gabi1926g00004 165 CDD HBS1_C_III 52 160 - -
Gabi1926g00004 165 FunFam elongation factor 1-alpha isoform X4 55 164 - -
Gabi1926g00004 165 SUPERFAMILY Translation proteins 2 85 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1926g00004 Gabi-Chr1926 99276 106042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1926g00004 1 163 Eukaryotic Initiation Factors Gene Family AT5G10630 67.485 1.10e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1926g00004 K14416 - gmx:100798594 280.411