Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1926g00003 ATGATTGAGCCATTCTTTCTCCTTGCATGCAAAGACAAGAGTGTGAGAGTGAGAGCAGAACCTTTGGTGGTTGTCCCATTCAACGATGGTGAAACAATTGGGCACTTGAAGTGGGCACAAATCGTGAATTGCTCCTCCAACCCCCATTCAATGTGCGGCTGTGAAGGTGTAGATGGAAGTCGTGTAATGGCAGGAGGTGTACTATCCCATCCTGACTTTCCTGTCACAGTTGCAAAGCATTTGGAGTTGAAAGTACTTCTCTTGGATGGTGCAAGTCCCTTATTGGGGGGCTCTCAGTTAGAGTTTCATATACACCATGCAAAGGAACCTGCTAGAGTTTCAAAAATATTGTCAGTACTTGATCCCAAGACTGGTAAGGTAACCAAAAAGTCCCCACGCTGTCTTACTGCAAAGCAAAGTGCAGTAATTGAGGTGATTTTGCACGAGACAGTCTGTGTAGTAGAGTTCTCTAGTTGCAAAGCACTTGGAAGGGTGTCCTTAAGATCATTAAGAAGAACAATTGCTGTTGGACTTGTGACAACAATTATTGAAGATGAAAATTAG 564 0.4362 MIEPFFLLACKDKSVRVRAEPLVVVPFNDGETIGHLKWAQIVNCSSNPHSMCGCEGVDGSRVMAGGVLSHPDFPVTVAKHLELKVLLLDGASPLLGGSQLEFHIHHAKEPARVSKILSVLDPKTGKVTKKSPRCLTAKQSAVIEVILHETVCVVEFSSCKALGRVSLRSLRRTIAVGLVTTIIEDEN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1926g00003 187 PANTHER TRANSLATION FACTOR 52 182 - -
Gabi1926g00003 187 CDD HBS1_C_III 74 182 - -
Gabi1926g00003 187 Pfam Elongation factor Tu C-terminal domain 77 182 IPR004160 -
Gabi1926g00003 187 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 79 183 IPR009001 -
Gabi1926g00003 187 Gene3D Translation factors 77 187 - -
Gabi1926g00003 187 FunFam elongation factor 1-alpha isoform X4 77 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1926g00003 Gabi-Chr1926 99276 106044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1926g00003 55 185 Eukaryotic Initiation Factors Gene Family AT5G10630 66.412 2.93e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1926g00003 K14416 - gmx:100801724 225.713