Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1920g00003 ATGGCATCATCCCTTTTAGGCCTAGTCCTATGTACTTGTCTGATCATTTTCTTTGCTGCCACGAATACTTCTGTTGAAGCTGCCATGCAATTCAAAGTTGGTGGTCACTTAGGTTGGCATGAACCTGGTCCCAACAATACTGAATTTTATATCCAATGGGCTGAAATGAACAGATTTCAAATTGGAGATTCTCTGGTTTTTGAGTACCAGAATGATTCAGTTCTTACAGTGGAGAAAATGGATTACTTTAATTGTGACTCAAGTGACCCCATCACTGCCTTTGACAATGGGAAGAGCACTCTTAATCTTGACAGGCCTGGGGCCTTCTACTTCATCAGTGGAACTGATGATCACTGCAACAACGGGCAAAAATTACTTGTGGAGGTGATGCACCCACATCCAATTCCAAAATTTCCACCTTCCATTTCCCTTCCACCTGAAGGTTTCTCCCCAGTGGCTTCTTCACCTTCTTATACCATAGAGGTTTCAGCCTCAATGGTGCTTAGTCCAATTTTTATGTGTCCTTTGGCCTCGCTTGCAAGTGTGATGATGCTGTTAGCACCCTGA 567 0.4339 MASSLLGLVLCTCLIIFFAATNTSVEAAMQFKVGGHLGWHEPGPNNTEFYIQWAEMNRFQIGDSLVFEYQNDSVLTVEKMDYFNCDSSDPITAFDNGKSTLNLDRPGAFYFISGTDDHCNNGQKLLVEVMHPHPIPKFPPSISLPPEGFSPVASSPSYTIEVSASMVLSPIFMCPLASLASVMMLLAP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1920g00003 188 Gene3D - 29 136 IPR008972 -
Gabi1920g00003 188 Pfam Plastocyanin-like domain 48 123 IPR003245 GO:0009055
Gabi1920g00003 188 SUPERFAMILY Cupredoxins 28 130 IPR008972 -
Gabi1920g00003 188 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Gabi1920g00003 188 PANTHER BLUE COPPER PROTEIN 27 153 IPR039391 GO:0009055
Gabi1920g00003 188 FunFam Early nodulin-like protein 1 28 134 - -
Gabi1920g00003 188 CDD OsENODL1_like 30 130 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1920g00003 Gabi-Chr1920 22280 23276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1920g00003 6 143 Phytocyanin Superfamily AT1G79800 50.000 4.26e-46 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1920g00003 - - gmx:100783893 243.047