Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1919g00001 | ATGGCAGATTATTCCAAAAACACAAAATGGAAGTACCATGTTTTCTTGAGTTTTAGGGGAGAAGACACACGCTTGGGTTTCACCGACCACTTATATGCAGCTTTGGTGCGAAAGAGTATCATAACTTTTAGAGATGATGAAGAACTTGCCAGAGGTGAAGTCATCTCTCATAAACTCCTCCTTGCAATTGAGGAATCTCTCTCTGCAATTGTCATAATCTCCAAAAACTATGCTTCCTCGTCTTGGTGTTTGGATGAGTTAGTTAAGATTCTTGAATCCAAACATGTGCTGGGACAAGATGTGTTTCCAGTCTTCTATGGTGTGGATCCCTCTGATGTAAGGAATCAGAGGGGAAGTTTTGCAGAAGCTTTTAGAAAACATGAAGAAAAATTTATAGAAAACAAAGAGAAGGTGCAAAAATGGAGAGATGCATTAAAAGAAGTTGCTAACTTGTCAGGGTGGGACTCTAAGGATCAACATGAAACAACTCTCATTGAAGAAGTTGTTGCACAAGTATGGAAGAAACTAGAACCCAAATTCCCTACATATAACGATGGACTAGTTGGAATTGATACAAGATTAGAAGATTTATATTCAACTTTGAAGCTAGGATTGGAGGATGTTCGTTTCATAGGGATATGGGGCATGGGTGGTATAGGTAAAACAACTCTCGCGACTGCTCTTTTCAAGAAAATTAGATGCCATTTTGATGTTAGTTGCTTTGTTGCCAATGTTAGAGAGGTCTCTGGGGAAAGAAACGAAGGTTTCGTGCAGTTACAAAATAAAATTCTTTTTCGTCTAAATATAAAAGGAATGTTAATTGAAACTTCAAGCCAAGGAAAGGACAGCTTAAGAAACCTTTTGTCCAACAAAAAGGTTCTTCTTGTCCTTGATGATGTAAGTTCTAAAAGCCAACTTGAGAATTTGGCTGGAAACCAAGATTGGTTTGGTCCAGGGAGTAGAATTATAGTAACAACTAGGGATAAGCACCTGCTCATATCTCATGTAGTACTGTTTGAGATGTATAAGAGTAAAATCTTAAACGATAATGAATCCCTTCAACTCTTCTGTGAAAAAGCATTTAAAAAAGATGAACCTAGAGAGGATTATTTGGAGTTGTCTAAAAATGTTGTTGAATATGCTGGAGGCCTTCCTCTGGCTCTTGAAGTGTTGGGTTCTTTTCTTTGTGGAAGAAGTATATCTGATTGGGAAGATGCTTTGATTAAGATTAAACAAGTTCCACATGATGATATCCTCAACAAACTTAGAATAAGTTATGACATGCTAGAAGATGAGCACAAGACCATATTTCTAGATATTGCTTGTTTTTTTAAGGGATGGTACAAACATAAAGTGACACAAATATTGGACAATTGCGGCCTTCATCCAACAATTGGATTAAATGTTCTTAGAGAAAAATCACTAGTAACTTACAATGGAAGAGTTATTGGGATGCACGATCTACTTGAAGAAATGGGAAAAACTATAGTTTTTCAAGAATCACCGAATGATCCTGGTAGACGGAGTAGATTGTGGTCTCTAGAGGATACTGATCATGTGCTGAGAAAAAATAAGGGAACGGAAATTGTCCAAGGTATAGTTTTGAAGTCATCACCATCTGAGCCATATGAAGCACATTGGGATCCTGAGGCCTTCTCAAAAATGTGTAATCTTAGATTACTCATTGTATTATGTGATTTGCATCTTCCCCTTGGTCTCAAATGTCTTTCTAGCTCACTAAAAGTGCTTGTATGGTCGGGATATCCATTGAATGCTTTGCCACTTGGAGTTCAACTAGATGAGCTTGTTCACCTACAAATGATCAATAGCAAAGTTAAGCAACTATGGAATGGAACTCAGTATGTTGGAAAGCTGAAAGTGATTGATTTGAGTAATTCCAAAGATCTACGACAAACTCCAAATGTTACTGGAGTTCCATATCTTGAAGAGCTTTATCTTAAAGATTGTACAAAACTTGTTGAAGTTCACCAATCTATCGGACAACACAAAAAGCTCCGGATATTGAGCTTTATAGGATGTGTAAACCTTAAAACCTTTCCAAGTAGATTGGAAATGTGTTCCCTCAAAATGTTTTATCTTTCTGACTGCTCAAAGGTTGAAAGACTTCCGAATTTGGGGGTAAATATGACATGTGTCTCAGTGCTTAATTTAATGAATTGCAAAAATCTTTTTTGCCTGCCAAATACCATTGGTAACTTGAAGTCTCTTAGAATTCTCAACATATCAGGATGCTCAAAAGTTTGTTGCCTGCCAGATAATATAAATCAAAACAAGGCTTTGGAGGATCTTGACTTGAGTGAAACTGCTATTAGCGAATTGGATCTATCAACACTTCAGTTGTGGAATCTCAAAAGGTTATCTTTAAGGGGTTGTAGTGGGCCAGGATCCAACACCAGCAGGGACTTGCATCTTCCTTTTGGGTGGAAATTTAGTTTTACCCCAGCTCCTACAAGCTTAATATTGTCTCCTTATATTGGCTTCAGTCTTTCCTCATTAACTGTTTTGAATTTAAGCTATTGCAATCTCACTGATGAGTCAATTCCTTTACGTCTCTATCGCTTATCATCGTTGGAGAGACTAATTTTAAGTGGGAACAATTTTGTACGCTTTCCTGGTCACTTCATTGCTAGTATTCCGAGGCTTCGCCGTGTTGAATTGGAAGATTGCTCAGAGCTTCGATCTCTGCCTGTGGTTCCACCACATGTTCGCCTGTACTTAGAAGATTCAGCTGCAATGGAAGCTAGTTTAGTAGATCAAGAAAAGCTTTGGAAGCTGTTTGAATCAGGTGACAAAGAGCTCTTTCAGTCAGCAGTATCTGACATTATGTGTCAGCTTCTGTTCGTTGAAATCCCACCATGGCTTGATAATAAAAATTTTGTCCCCTTGAGCTCATCGAATGTCTCAAAACATGATTCAATTGCAACACTAATAATGGACATTCCTGATGATTGTCGTTCAAGTGATTGGTGGGGAGTAGCCGTATTTGTGTCCTTAAAAGCCGAAGTTTATCGGGATATTTTTGAACGTGTTCCGCTCAAAATGCGCCTTTTTTGGAGCTTTGACTCTCTCGATCCTGAGGATGGCCCCTCCTTATCACTGGCCTCAAGTTCAATTGCATATAATGACATATACATGTTAACAATGATAGTAAGTGGTGATTATATATACATTCGGCAACACAGTAGAAGGAACGGCGAGTTCACCCAGCATCCCTTTAGCAAGCATCCAAAGCCAGAGTTCAGGCAAAACAGTACGCTGCGTTTTGAAGCACAAGTGGAAGGGCGCAATATAAGGAAGTGTGGGTGGCGTGTGTTACGCAAGGAAGATAGTCTTCAAGCCTTGCAAAAGGTAAAAGACAGCGAGCTTTTTGAGACACGTTCTGATTCCGAGCATTCCAGTGGCATGAGCAAAACATTGGAAATTCCAATAATGGCAGAGTATGCCGTTACTGCTTTGGGTGACCAAAACAAGGAAAAATCCACTGAGAACTTGTGGTTGGGAAAAAGACAGGGAGTGGGTTTAAGCGTGGTAGCTTTGATGTCAATGATGGCCGTTGGGGCTACAATATTCCTTTCGCATAGGCAGGGTTCGGGCTTTAAACAACACACCACAACGAATGAGGCAGCAGCTAAACTATTCAAATCACGTTGGGGTTCCAATGGAAGTGCAATTAAGGTCAATAAATCGCAATTCCCACGCAAACATAACACAAATGCGAGCCAGCGATTGTCATTTTCAGCACATCACCCACCAAGGAAGCTCAGTTTCTCTCCGAGTCATTACTGTTCTTACTTTACTAGATGA | 3825 | 0.3932 | MADYSKNTKWKYHVFLSFRGEDTRLGFTDHLYAALVRKSIITFRDDEELARGEVISHKLLLAIEESLSAIVIISKNYASSSWCLDELVKILESKHVLGQDVFPVFYGVDPSDVRNQRGSFAEAFRKHEEKFIENKEKVQKWRDALKEVANLSGWDSKDQHETTLIEEVVAQVWKKLEPKFPTYNDGLVGIDTRLEDLYSTLKLGLEDVRFIGIWGMGGIGKTTLATALFKKIRCHFDVSCFVANVREVSGERNEGFVQLQNKILFRLNIKGMLIETSSQGKDSLRNLLSNKKVLLVLDDVSSKSQLENLAGNQDWFGPGSRIIVTTRDKHLLISHVVLFEMYKSKILNDNESLQLFCEKAFKKDEPREDYLELSKNVVEYAGGLPLALEVLGSFLCGRSISDWEDALIKIKQVPHDDILNKLRISYDMLEDEHKTIFLDIACFFKGWYKHKVTQILDNCGLHPTIGLNVLREKSLVTYNGRVIGMHDLLEEMGKTIVFQESPNDPGRRSRLWSLEDTDHVLRKNKGTEIVQGIVLKSSPSEPYEAHWDPEAFSKMCNLRLLIVLCDLHLPLGLKCLSSSLKVLVWSGYPLNALPLGVQLDELVHLQMINSKVKQLWNGTQYVGKLKVIDLSNSKDLRQTPNVTGVPYLEELYLKDCTKLVEVHQSIGQHKKLRILSFIGCVNLKTFPSRLEMCSLKMFYLSDCSKVERLPNLGVNMTCVSVLNLMNCKNLFCLPNTIGNLKSLRILNISGCSKVCCLPDNINQNKALEDLDLSETAISELDLSTLQLWNLKRLSLRGCSGPGSNTSRDLHLPFGWKFSFTPAPTSLILSPYIGFSLSSLTVLNLSYCNLTDESIPLRLYRLSSLERLILSGNNFVRFPGHFIASIPRLRRVELEDCSELRSLPVVPPHVRLYLEDSAAMEASLVDQEKLWKLFESGDKELFQSAVSDIMCQLLFVEIPPWLDNKNFVPLSSSNVSKHDSIATLIMDIPDDCRSSDWWGVAVFVSLKAEVYRDIFERVPLKMRLFWSFDSLDPEDGPSLSLASSSIAYNDIYMLTMIVSGDYIYIRQHSRRNGEFTQHPFSKHPKPEFRQNSTLRFEAQVEGRNIRKCGWRVLRKEDSLQALQKVKDSELFETRSDSEHSSGMSKTLEIPIMAEYAVTALGDQNKEKSTENLWLGKRQGVGLSVVALMSMMAVGATIFLSHRQGSGFKQHTTTNEAAAKLFKSRWGSNGSAIKVNKSQFPRKHNTNASQRLSFSAHHPPRKLSFSPSHYCSYFTR | 1274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1919g00001 | 1274 | PRINTS | Disease resistance protein signature | 287 | 301 | - | - | |
Gabi1919g00001 | 1274 | PRINTS | Disease resistance protein signature | 210 | 225 | - | - | |
Gabi1919g00001 | 1274 | PRINTS | Disease resistance protein signature | 738 | 754 | - | - | |
Gabi1919g00001 | 1274 | PRINTS | Disease resistance protein signature | 381 | 395 | - | - | |
Gabi1919g00001 | 1274 | SMART | till_3 | 11 | 151 | IPR000157 | GO:0007165 | |
Gabi1919g00001 | 1274 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 348 | 430 | - | - | |
Gabi1919g00001 | 1274 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 440 | IPR027417 | - | |
Gabi1919g00001 | 1274 | Gene3D | - | 346 | 430 | IPR042197 | - | |
Gabi1919g00001 | 1274 | Pfam | TIR domain | 11 | 185 | IPR000157 | GO:0007165 | |
Gabi1919g00001 | 1274 | Gene3D | - | 8 | 176 | IPR035897 | - | |
Gabi1919g00001 | 1274 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 12 | 710 | IPR044974 | GO:0006952 | |
Gabi1919g00001 | 1274 | Gene3D | - | 177 | 337 | IPR027417 | - | |
Gabi1919g00001 | 1274 | SUPERFAMILY | L domain-like | 486 | 904 | - | - | |
Gabi1919g00001 | 1274 | Gene3D | Ribonuclease Inhibitor | 823 | 922 | IPR032675 | - | |
Gabi1919g00001 | 1274 | Gene3D | Ribonuclease Inhibitor | 546 | 692 | IPR032675 | - | |
Gabi1919g00001 | 1274 | Gene3D | Ribonuclease Inhibitor | 693 | 766 | IPR032675 | - | |
Gabi1919g00001 | 1274 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 3 | 154 | IPR035897 | - | |
Gabi1919g00001 | 1274 | ProSiteProfiles | TIR domain profile. | 10 | 176 | IPR000157 | GO:0007165 | |
Gabi1919g00001 | 1274 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 8 | 178 | - | - | |
Gabi1919g00001 | 1274 | Pfam | NB-ARC domain | 206 | 412 | IPR002182 | GO:0043531 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1919g00001 | Gabi-Chr1919 | 10855 | 15705 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1919g00001 | 12 | 793 | WRKY Transcription Factor Family | AT4G12020 | 31.227 | 6.82e-94 | 331 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi1919g00001 | - | - | vvo:131658213 | 1765.74 |