Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1915g00001 ATGATATATAAGCGTGATATAGATGATGTTATCATTAAAAAATATAAAATGCAAGAGCTAAATGATGATGACTCTCTAGAACTCTTCTGCTGGCATGCCTTTAATATGAGTGGACCTGCAGAAAACTATGCAGGTGTTTCTAGTCGTGCAGTAAGTTATGCAAAGGGTGTTCCATTGGTTTTAAAAGTAATAGGCTCCAATTTGAAGGGTGGGAGCCTAGAGGATTGGGAAATGGAGCTGGACAAATATAAGAAGATTTCAAATGCTGAGTTTCAAGGTGTGCTTGAAATAAGCTACAATAGCTTGTCAGAGTTGAACCAGAAAACTTTCTTGGACATTGCTAGTTTTTTCAAAGGGGAGAGATGGGAATATGTTAAAAGGTTACTAAAGGTTTGTGATTTCTTTCCAATTATTCGAGTATTTGCAAGTAAAAGTCTCATAACTATTGATGAAAATGGTTGCTTGGAGATGCATGATTTAATACAAGAAATGGGTAGAGAGATTGTTAGAAAGGAGTCACCATCAAATCATGGTGACCGTAGTAGAATATGGTATCATAAAGAGGTTCTTCAAGTGCTTAAAGAAAATTCGATTGCTGCCAACCTTAATACAAGAATACCAGGATCACTACCAAGGGACACTGATGTTCCCTCAACAGCATCAACAACCTCACCAAAAGAAGTACTTACTTTGCCCAGTTCCCCTTTAGAGAAAATCAAAGATGTCACCTTGCGAAGTGGAAAAACCACTACACAACCCACCACTCTGCATGAGGAAGAGAAACAGAATAAAGCATCTGAAGCAACCTCAGAAGAAGAACAACAACAACCAGCCACAGATGAGCAGAACCTATAG 855 0.3825 MIYKRDIDDVIIKKYKMQELNDDDSLELFCWHAFNMSGPAENYAGVSSRAVSYAKGVPLVLKVIGSNLKGGSLEDWEMELDKYKKISNAEFQGVLEISYNSLSELNQKTFLDIASFFKGERWEYVKRLLKVCDFFPIIRVFASKSLITIDENGCLEMHDLIQEMGREIVRKESPSNHGDRSRIWYHKEVLQVLKENSIAANLNTRIPGSLPRDTDVPSTASTTSPKEVLTLPSSPLEKIKDVTLRSGKTTTQPTTLHEEEKQNKASEATSEEEQQQPATDEQNL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1915g00001 284 Coils Coil 256 276 - -
Gabi1915g00001 284 MobiDBLite consensus disorder prediction 204 284 - -
Gabi1915g00001 284 SUPERFAMILY "Winged helix" DNA-binding domain 90 194 IPR036390 -
Gabi1915g00001 284 Gene3D - 19 103 IPR042197 -
Gabi1915g00001 284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 199 IPR044974 GO:0006952
Gabi1915g00001 284 MobiDBLite consensus disorder prediction 204 230 - -
Gabi1915g00001 284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 113 IPR027417 -
Gabi1915g00001 284 MobiDBLite consensus disorder prediction 254 268 - -
Gabi1915g00001 284 MobiDBLite consensus disorder prediction 269 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1915g00001 Gabi-Chr1915 12991 17480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1915g00001 15 184 WRKY Transcription Factor Family AT5G45050 38.728 9.86e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1915g00001 - - tpra:123920924 297.36