Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1907g00020 ATGCCAAACACGAGAAATCTGAGGCACCTCAACCTCAACATGTGTTTCTCAAATTCCACTCCTGAATCAAAATCTCCTCCTATGAGTCCCATTGTCACTGCTACAACTTCCTCACCTCATCATATTCATCACAACCCTCCATCTCCATCGCCTTCAATTATGATTAAAAACTTCAACTCTCTCTATAACCCTACCTTAACCATGGACCACTCTGTTTGCTCCTCTTCCCTTTCCACCACCTCCACTTCCTTTGAACCCGAACCCGAACCCGCCGACTTCGCCACCGCCTTTGCCTCCAAACGCTTCTTCTTCTCCTCTCCTGGCCGCTCCAACTCCCTCATTGAATACACAAAAACCAACACATCCAGACCGGCGCCGCCAGGTGGCGCCGATGGTTGCAAGAAGAAGAAGAAGGCAATGTTCAACGGCAGCGTGGCGGTGCCGACCTACTCGCCTGACCCTTATCTGGACTTCCGGCGATCCATGCAGGAGATGGTGGAGGCGCGTCCCGAGCTGATGGACGTGAAGTCCAATTGGAACATCTTGCACGAGCTTCTTCTTTGTTATCTTGCGCTCAACCCAAAGAGCAACCACAAGTTCATTCTTGGTGCTTTTGCTGATCTCATCGTTAGCCTCATGTCATTCTAG 648 0.5046 MPNTRNLRHLNLNMCFSNSTPESKSPPMSPIVTATTSSPHHIHHNPPSPSPSIMIKNFNSLYNPTLTMDHSVCSSSLSTTSTSFEPEPEPADFATAFASKRFFFSSPGRSNSLIEYTKTNTSRPAPPGGADGCKKKKKAMFNGSVAVPTYSPDPYLDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKSNHKFILGAFADLIVSLMSF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1907g00020 215 Pfam Transcriptional repressor, ovate 151 212 IPR006458 -
Gabi1907g00020 215 MobiDBLite consensus disorder prediction 17 50 - -
Gabi1907g00020 215 NCBIfam uncharacterized plant-specific domain TIGR01568 145 213 IPR006458 -
Gabi1907g00020 215 ProSiteProfiles OVATE domain profile. 147 211 IPR006458 -
Gabi1907g00020 215 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 43 212 IPR038933 GO:0045892
Gabi1907g00020 215 MobiDBLite consensus disorder prediction 17 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1907g00020 Gabi-Chr1907 239779 240426 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi1907g00020 Ovate 1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1907g00020 - - aprc:113871147 306.99