Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1901g00008 ATGCTCTCCGCTCTTCCTCCCTCCGACCACCTTCTCGGAAACCCATTCTCCGCCTTCGCCGGCGGTTTCACTCAGTGGGATTGCCACGACCTCTTCTCCGCCGGCGGCGCCCTCAAACCCACCAATCCCAAACCCGTATATTCGACTTCCGGTTCAGACGAACCGGACCAAACCCATGGCGAACCGAAACCGGTCCCCGACGAACCGAATCAACGTGCTGAGTCGGTCATGGACGAGCGAAAGCGGCGACGCATGATATCGAACCGGGAATCCGCCCGGAGGTCGCGGATGCGGAAACAGAGGCACCTTGAGAACCTACGGAACCAGTTGAACAAGTGTAGGATCGAAAAACGTGAACTGAACAACCGGTTGCAGTTCATCCTGTACCACTGTAACCGCGTACAAACCGAAAACGAATGGCTCCGGTCCGAGCGAACCGTGCTCAGTCAAAAACTGTCCAACTTCACTCAAATTTTGGTTTTCCAACCTTTCTCCTCTGCATGGACCTGCAATAGTACTACGGTCATGACAGAATAA 537 0.5475 MLSALPPSDHLLGNPFSAFAGGFTQWDCHDLFSAGGALKPTNPKPVYSTSGSDEPDQTHGEPKPVPDEPNQRAESVMDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRIEKRELNNRLQFILYHCNRVQTENEWLRSERTVLSQKLSNFTQILVFQPFSSAWTCNSTTVMTE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1901g00008 178 Gene3D - 78 157 - -
Gabi1901g00008 178 PANTHER BZIP TRANSCRIPTION FACTOR 44 48 162 - -
Gabi1901g00008 178 CDD bZIP_plant_GBF1 81 132 IPR045314 GO:0003700|GO:0006355
Gabi1901g00008 178 MobiDBLite consensus disorder prediction 35 101 - -
Gabi1901g00008 178 Coils Coil 89 123 - -
Gabi1901g00008 178 MobiDBLite consensus disorder prediction 56 93 - -
Gabi1901g00008 178 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 78 125 IPR004827 GO:0003700|GO:0006355
Gabi1901g00008 178 SMART brlzneu 76 140 IPR004827 GO:0003700|GO:0006355
Gabi1901g00008 178 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 98 IPR004827 GO:0003700|GO:0006355
Gabi1901g00008 178 SUPERFAMILY Leucine zipper domain 80 128 IPR046347 GO:0003700|GO:0006355
Gabi1901g00008 178 FunFam BZIP transcription factor 78 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1901g00008 Gabi-Chr1901 123796 124608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1901g00008 11 161 bZIP Transcription Factor Family AT3G49760 41.722 7.44e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1901g00008 - - ahf:112800711 218.779