Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi189g00003 ATGAACCTTCTTCTACTTGGTCTCTTTGGTGATCAGGTACTCTGTAAATTTTTACTTGGGATCTCGGTTTTGGCATCTTTCATGGAGACTCAAAATCAATCAGAGCCTACAGTAGGATTAACAAGGATGATTCCTCCACCATCCGGAACTTTCCAAGATCGTGAAGACCTCATTAAACATGTTCGTGATTTTGGTGCCAATCAAGGATATGTTGTGACCATCAAGAAGTCCAGAAAGGATAGAAGAGTCATCCTTGGCTGTGACAGAGGAGGTGTCTATCGAAATAGGCGCAAAATTGATGAAAGTAAGCGCAAAAGGAAAGTAACTTCACGCCTTATAAACTGTCCTTTTGAAGCCATAGGTAAAAAGGAAGATGATGTATGGGTTCTTACTATAAAAAATGGAGATCACAATCATGATCCATTGAAAGACATGTCAGAACATCCTTATAGTCGACGTTTCACTGAGGAAGAAGTGAGACAAATCAAATTAATGACTGAAGCTGGTATAAAACCTCGTCAAGTGCTCAAAGCTCTCAAGCAAAGCAATCCAGAACTGCAGTCAACACCAAGGCACTTGTACAACCTCAAAGCAAAGATTCGGCAGGGAAATCTATCAGAGAAAACTTTTAAGTCATGGAGGCCAAATAGATCTATTCCTGTTGAGACAAACGATAGTTCATCTGATGGTTCTTTAAACCAAAACTACCATCTGCTGAAGGTCCCAAATTTTATTGGAGGTAAATATGTAGATTCTCAAGGCTGTGTTATCATTGATGTTACGAATCCTGCAACACAAGAAGTTGTATCTCAAGTTCCCATAACAACATACGAAGAGTTTAAAGCTGCAGTTAGTGCAGCCAAGCAAGCTTTTCCTTCATGGAAAAACACTCCTATCACCGCTCGTCAACGTATTATGCTTAAACTTCAGGAGCTTATTCGTAGAGATATTGATAAGCTTGCCATGAATATCACCATAGAACAGGGCAAAACATTAAAAGGTGCCCAAGGAGATGTGCTTCGTGGTTTAGAAGTGGTAGAACATGCTTGTGGGATGGCAAATTTGCAAATGGGGGAATTTGTCCCTAATGTTGGTAATGGGATTGATACATACAACATCAAAGAGCCCCTTGGAGTTTGTGCTGGAATCTGCCCCTTTAACTTTCCAGCAACGGTACCCTTGTGGATGTTCCCAATAGCGGTTACATGTGGAAACACTTTTATTCTCAAGCCATGTGAGAAAAATCCAGGTGCTTCAATGATACTTGCAGCACTAGCAATGGAAGCTGGTTTGCCAGATGGTGTATTCAATATTGTTCATGGTACCCATGATATTGTTAATTACATATGCGATGATGAAGATATAAAAGCTGTCTCGTTTGTTGGTCCAATAACAGCAGGAACGCACATATATTCCAGGGCTGCTGCTAGTGGGAAACGTGTTCAGTCAAATGCAGGTGGAATAAATCATGTAATTATTATGCCCGATGCTAGCTTGGATGCTACTCTAAATGCCCTTGTTCCTGCTGGCTTTGGTGCAGCAGGAGAGAGGTGCATGACTTTAAGCACAGCTGTATTTGTTGGAGGTTCAATGCGATGGGAAGATAAACTAGTGCAGCGTGCCAAATTACTTAGAGTCAATGCAGGAACAGATCCTGGTGCAGACATAGGTCCAGTTATTAGCAAAGAGGCAGAGGAGCGGATATGTAGACTAGTTCAGAGCAGTGTTGAAAATGGTGCAAGACTCCTACTTGATGGTAGACATATTGTGGTTCCAGGATATGAGAACGGAAACTTTGTTGGTCCTACTATCTTATGTGATGTTACAACCAACATGGAGTGTTACAAGGAAGAAATTTTCGGACCTGTTCTACTTTGCATGCAGGCTGACAACCTAGATGAGGCTATATCAATAATAAATAAAAACAGATACGGAAATGGAGCTTCTATATTCACCACATCTGGTATAGCTGCTAGGAGGTTCCAGAACGAGGTTGAGGCTGGACTGGTTGGGATCAATTTGCCTGTACCTGTTCCACTACCATTTTCCTTCGATGGATCAAAGGCATCTTTCGCTGGTGATTTCAGTTTTTGTGGAAAAACAGGAGTACAGTTTTATACCCAAACCAAAACAGTAGCACAACAATGGAAGGATTTCCCTAGACGAGTATTCCCTGCTGCATGTCCATCTGAGAGAAATTCACCTAGGCAATTGGCACCACAAATAATGCCTATAGAATCTGAAAGTGATTCACCAACCTATGAAGAACAACCGGAAATAACTGATGCAGATATACAGAACACAACCATGTCATCTGCATCTCCATCAACTGATAAGGATCACAGAAGCCAGGATATTTCCCTAGTTCTGCCTTCAACATCTGAGAGGGATATATCAGATCAGGATATGTCACTGGCATTATCACCTACATTGCAGAGGGACTTACCGAGCCGAGGAGTATCTGTAGCCACACCACAGGCATCAGAGAGGATGTATGTTTCTAAAACATCTCAGTGGAATGATACTTCACCTGCAACATCTCAAAGGAGTGAAACTATTCCACCAAGTTCTGATAGGGGTCATGTGTCTGCATCTCAGATGAATGTAGACATATTTACAGCGTCCCAGAGGACTGATACTGCCACAGCTTTGAAACCAGAGGGAATATACATGCCCATGTCTGATAACATAGCTCAAATATCACAAGGGAGTGATAACATGAGTCCAGTGTCTCAAAGGATGGTGGATACTACTATGCATCCAACTTCTGATAGGACATATATTCTGGCAGCATCTCATTTAAATCAAAGTGTTGGTCAAACATTTGAAAGAACCGACCCCATGTTTCCAACTTCTGAGAGAATATACATGCCTGCAACATCTCAAAGGAGTGACCATATTGGCTCAACATCTCACAGTACTGATATTGGCTTACGTCTAAATTCAGAGAGGATATATATCTCTGCTGCTTCTCAAAGAAATGATAGTATTAGTCCAGCTTCTCAGCTTGATAATGCTTTGCCTCCTTCTTCTGAGAAGGCCTTCATGCCTCCAATAGTACAGAATAAGCCGCCAAGATCAGAGAGGTTATATATTCCTACAAATTCTCAAAGGATGTATAATCAAAACCCAATAATTTCAATGGATGAATTTCCTAGCCAAGCTGCGGCTATGACTTTGCCATCATCTCAGAGAATATAA 3201 0.4136 MNLLLLGLFGDQVLCKFLLGISVLASFMETQNQSEPTVGLTRMIPPPSGTFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESKRKRKVTSRLINCPFEAIGKKEDDVWVLTIKNGDHNHDPLKDMSEHPYSRRFTEEEVRQIKLMTEAGIKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQGNLSEKTFKSWRPNRSIPVETNDSSSDGSLNQNYHLLKVPNFIGGKYVDSQGCVIIDVTNPATQEVVSQVPITTYEEFKAAVSAAKQAFPSWKNTPITARQRIMLKLQELIRRDIDKLAMNITIEQGKTLKGAQGDVLRGLEVVEHACGMANLQMGEFVPNVGNGIDTYNIKEPLGVCAGICPFNFPATVPLWMFPIAVTCGNTFILKPCEKNPGASMILAALAMEAGLPDGVFNIVHGTHDIVNYICDDEDIKAVSFVGPITAGTHIYSRAAASGKRVQSNAGGINHVIIMPDASLDATLNALVPAGFGAAGERCMTLSTAVFVGGSMRWEDKLVQRAKLLRVNAGTDPGADIGPVISKEAEERICRLVQSSVENGARLLLDGRHIVVPGYENGNFVGPTILCDVTTNMECYKEEIFGPVLLCMQADNLDEAISIINKNRYGNGASIFTTSGIAARRFQNEVEAGLVGINLPVPVPLPFSFDGSKASFAGDFSFCGKTGVQFYTQTKTVAQQWKDFPRRVFPAACPSERNSPRQLAPQIMPIESESDSPTYEEQPEITDADIQNTTMSSASPSTDKDHRSQDISLVLPSTSERDISDQDMSLALSPTLQRDLPSRGVSVATPQASERMYVSKTSQWNDTSPATSQRSETIPPSSDRGHVSASQMNVDIFTASQRTDTATALKPEGIYMPMSDNIAQISQGSDNMSPVSQRMVDTTMHPTSDRTYILAASHLNQSVGQTFERTDPMFPTSERIYMPATSQRSDHIGSTSHSTDIGLRLNSERIYISAASQRNDSISPASQLDNALPPSSEKAFMPPIVQNKPPRSERLYIPTNSQRMYNQNPIISMDEFPSQAAAMTLPSSQRI 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi189g00003 1066 MobiDBLite consensus disorder prediction 727 784 - -
Gabi189g00003 1066 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 245 492 - -
Gabi189g00003 1066 MobiDBLite consensus disorder prediction 992 1027 - -
Gabi189g00003 1066 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 486 685 IPR016163 GO:0016620
Gabi189g00003 1066 MobiDBLite consensus disorder prediction 758 777 - -
Gabi189g00003 1066 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 80 866 IPR010061 GO:0004491
Gabi189g00003 1066 MobiDBLite consensus disorder prediction 835 862 - -
Gabi189g00003 1066 MobiDBLite consensus disorder prediction 992 1008 - -
Gabi189g00003 1066 Pfam Aldehyde dehydrogenase family 250 712 IPR015590 GO:0016491
Gabi189g00003 1066 SUPERFAMILY ALDH-like 234 718 IPR016161 GO:0016491
Gabi189g00003 1066 CDD ALDH_F6_MMSDH 241 716 IPR010061 GO:0004491
Gabi189g00003 1066 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 486 685 - -
Gabi189g00003 1066 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 260 693 IPR016162 GO:0016491
Gabi189g00003 1066 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 242 716 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi189g00003 Gabi-Chr189 99641 137787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi189g00003 240 703 Aldehyde Dehydrogenase Gene Family AT2G14170 74.839 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi189g00003 K00140 - gmx:100796803 1604.73