Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1899g00003 ATGGATCACTCCCACATAACAACTATTGAAGACATTGACATAAGTGGAAGCTTAGTATATGCTGATGACGTTGTTGATTTGGAGAAAGACAATGATGAATTCAGAGAAGATGAACAGTGTAAAATCTTTGACGATGAAAATGGTGAATGTGGTGAAGATAATGTACATGAAATTGTTGGAGATGATGACAGTGGGTTGAGTGAGGCCCCAATTTTAGGGAGAGTCTTTAAGACAGCAGAAGAAGCTTATGGTTTCAATAATGACTATGCACAATGTAAGGGATTTGGAATACGTAAGCAATACACTAGCAGAAAGTTCAAAACGCAAGAAATATATAGGTGGAATTATGTGTGCTCAAAGCAAGGTGTCAAGAAACAAAACCATAAAAGAGTTGATGTTGAAAATGTCAAAAGGCGAAGGGATTCAAGGACAAATTGTTCAGCGATGTTACAAGAAAAGTTAGTGGATGAATTATGGATCGTGGAGAAGTTTAATGATGCGCATAATCATCCGTTGATGTTGACTCCTTCAAAGGTGAGGAAGTTTCATTCTCATAGTGATTTACTACGCTCAAATTTCACTAAATCACTTGTTTCTAAGCTTTTTGAGGAGGGTTTAACGTCGTCAAAAATTTCAAAGAGGTGGTGA 648 0.3688 MDHSHITTIEDIDISGSLVYADDVVDLEKDNDEFREDEQCKIFDDENGECGEDNVHEIVGDDDSGLSEAPILGRVFKTAEEAYGFNNDYAQCKGFGIRKQYTSRKFKTQEIYRWNYVCSKQGVKKQNHKRVDVENVKRRRDSRTNCSAMLQEKLVDELWIVEKFNDAHNHPLMLTPSKVRKFHSHSDLLRSNFTKSLVSKLFEEGLTSSKISKRW 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1899g00003 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 187 - -
Gabi1899g00003 215 Pfam FAR1 DNA-binding domain 85 173 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1899g00003 Gabi-Chr1899 54817 55464 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi1899g00003 FAR1 7.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1899g00003 - - lsv:128132276 128.642