Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1898g00014 ATGTCGAAGGAAGGCACCAACAATGGCGGCGGCAGCTCCGGTAACTGGACTCGCCTCTGTGACACATGCCAGTCGGCGGCATGCACCGTGTACTGCCGTGTTGACTCGGCGTACCTGTGCTCAAGCTGTGACGCTCGCGTCCATGCAGCCAACAACATCGCTTCAAGGCACCACCGTATGTGGGTTTCTAAGGCTTCTATGTGCTCAAACATTCGTGGTGTGCCTGTTCTTCCTCTCTCTAGTTGTCTCTTTGTTGGTGAACAAGATCATGGATTCATAGGTAATGGATGTGACGTTGACAAGGTTGTTATTAAAGAGGACGATGAGGCAGAAGCAGCTTCGTGGTTGTTGCCAAATCCTGTGATGAAGAACGAAGAAAATCAGAGTTTCTTGTTTGGTGGAGATGTTGATGAGTATATAAAACTTGGTGACAAACAGTTCAGTTCTCTTCACTATGATGACAAGCAGCATAATTACCGTTCTGTCCCTCTGAACTATGCACTAGGAAATGCCCAAGCTCAGGTTAAGCAACAATCACACCTTTTTCAACCGGGTTTGGATTTTGACTCATCAAAAGTTGGGTTCAGTTATGATGGTTCTCTTGGTCAAAGTGTTTCAGTTTCACCAGTGGATGTTGGCACTGTACCAGAATCAACAATCAGTAATGTCTCATTTTCCCATTCAAAATCACCAATAGGTGACATATTTCCTCCCATTCTATTGCCTTCACATTTTACTCCAATGGATAGAGAGGCCAGAGTTCTAAGATACAGGGAGAAAAAGAAAACAAGAAAGTTTGAAAAGAAAATCAGGTATGCCACAAGGAAAGCCTATGCAGAGAGTAGACCCCGCATAAGAGGTCGATTTGCAAAGAAAGCTGATGTAGAAGCTGAAGTGGACCCTATGCTCTCCACAACTCTAGTGACAGAAACTGGATGTACCATTGTTCTCCCTTCATGA 960 0.449 MSKEGTNNGGGSSGNWTRLCDTCQSAACTVYCRVDSAYLCSSCDARVHAANNIASRHHRMWVSKASMCSNIRGVPVLPLSSCLFVGEQDHGFIGNGCDVDKVVIKEDDEAEAASWLLPNPVMKNEENQSFLFGGDVDEYIKLGDKQFSSLHYDDKQHNYRSVPLNYALGNAQAQVKQQSHLFQPGLDFDSSKVGFSYDGSLGQSVSVSPVDVGTVPESTISNVSFSHSKSPIGDIFPPILLPSHFTPMDREARVLRYREKKKTRKFEKKIRYATRKAYAESRPRIRGRFAKKADVEAEVDPMLSTTLVTETGCTIVLPS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1898g00014 319 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Gabi1898g00014 319 Pfam CCT motif 250 292 IPR010402 GO:0005515
Gabi1898g00014 319 CDD Bbox1_BBX-like 19 62 - -
Gabi1898g00014 319 ProSiteProfiles CCT domain profile. 250 292 IPR010402 GO:0005515
Gabi1898g00014 319 SMART bboxneu5 15 62 IPR000315 GO:0008270
Gabi1898g00014 319 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 303 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1898g00014 Gabi-Chr1898 225758 227723 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1898g00014 1 316 C2C2-CO-like Transcription Factor Family AT3G02380 43.251 1.10e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi1898g00014 CCT 8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1898g00014 - K12135 gmx:100782635 338.191