Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1893g00017 ATGAACTTTCCTAGTGAAAATTTACTCCATCCTGTTCTTATGCTAATTGGATTAATAATTATTGGAGGTGAAGCTATTATAAGCTACAAATCTCTTCCATTGAAAAAGGAAGTCAAGAAATTGATACACATGGTTCTCCATAAAATCGCATTAATACTTGGAATAACTGGAATTTATACTGCCTTCAAGTTTCATAATGAAAGTGGGATTCCCAATATGTACAGCTTGCATTCATGGCTTGGAATTGGTGTTATTGTCCTTTATGGAATTCAGTGGATATTTGGGTTTGTGATCTTTCTCTACCCTGGAGCGAGTTCAACCCTAAGAGTCAATTTACGTCCTTGGCATGTCCTATATGGGCTTGTTGTATATCTCTTGGCTGTTGGAACTGCTTCTCTTGGGTTTTTGGAAAAACTCACTTTCCTGCAGAACTCAGCAGGATTGGCAAAATATGGTTCTGAGGCCTTCCTTGTCAATTTCACTGCCATTGTCACTATCTTATATGGTATATTTGTTGTATTATCTGCTATTTCTCAGGGACCCCCTTCAGATGATGACTACGCACACATATAG 573 0.3787 MNFPSENLLHPVLMLIGLIIIGGEAIISYKSLPLKKEVKKLIHMVLHKIALILGITGIYTAFKFHNESGIPNMYSLHSWLGIGVIVLYGIQWIFGFVIFLYPGASSTLRVNLRPWHVLYGLVVYLLAVGTASLGFLEKLTFLQNSAGLAKYGSEAFLVNFTAIVTILYGIFVVLSAISQGPPSDDDYAHI 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1893g00017 190 Pfam Eukaryotic cytochrome b561 9 141 IPR006593 -
Gabi1893g00017 190 SMART 561_7 9 135 IPR006593 -
Gabi1893g00017 190 CDD Cyt_b561_ACYB-1_like 9 143 - -
Gabi1893g00017 190 FunFam Cytochrome b reductase 1 3 185 - -
Gabi1893g00017 190 Gene3D - 3 185 - -
Gabi1893g00017 190 PANTHER CYTOCHROME B561-RELATED 9 178 IPR043205 GO:0016491
Gabi1893g00017 190 ProSiteProfiles Cytochrome b561 domain profile. 1 177 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1893g00017 Gabi-Chr1893 177331 180916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1893g00017 9 179 Chloroplast and Mitochondria Gene Families AT4G25570 70.760 4.09e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1893g00017 K08360 - qsa:O6P43_004312 262.307