Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi1893g00016 | ATGGGGTTGGGTGTACCTGCGATTCCATTCACGTTTGTAGTTCACATATTGGGAGTTGCTGGTATTGTGATGGTGTTGGTTTGGAACATACATTTCAGGGGTGGCTTAGCTTGGGATTCTTCAAACAAAGCTCTCATTTTTAATCTCCATCCTGTTCTTATGCTAATTGGATTAATAATTATTGGAGGTGAAGCTATTATAAGCTACAAATCTCTTCCATTGAAAAAGGAAGTCAAGAAATTGATACACATGGTTCTCCATAAAATCGCATTAATACTTGGAATAACTGGAATTTATACTGCCTTCAAGTTTCATAATGAAAGTGGGATTCCCAATATGTACAGCTTGCATTCATGGCTTGGAATTGGTGTTATTGTCCTTTATGGAATTCAGTGGATATTTGGGTTTGTGATCTTTCTCTACCCTGGAGCGAGTTCAACCCTAAGAGTCAATTTACGTCCTTGGCATGTCCTATATGGGCTTGTTGTATATCTCTTGGCTGTTGGAACTGCTTCTCTTGGGTTTTTGGAAAAACTCACTTTCCTGCAGAACTCAGCAGGATTGGCAAAATATGGTTCTGAGGCCTTCCTTGTCAATTTCACTGCCATTGTCACTATCTTATATGGTATATTTGTTGTATTATCTGCTATTTCTCAGGGACCCCCTTCAGATGATGACTACGCACACATATAG | 693 | 0.3925 | MGLGVPAIPFTFVVHILGVAGIVMVLVWNIHFRGGLAWDSSNKALIFNLHPVLMLIGLIIIGGEAIISYKSLPLKKEVKKLIHMVLHKIALILGITGIYTAFKFHNESGIPNMYSLHSWLGIGVIVLYGIQWIFGFVIFLYPGASSTLRVNLRPWHVLYGLVVYLLAVGTASLGFLEKLTFLQNSAGLAKYGSEAFLVNFTAIVTILYGIFVVLSAISQGPPSDDDYAHI | 230 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi1893g00016 | 230 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Gabi1893g00016 | 230 | CDD | Cyt_b561_ACYB-1_like | 40 | 183 | - | - | |
| Gabi1893g00016 | 230 | Gene3D | - | 4 | 225 | - | - | |
| Gabi1893g00016 | 230 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 217 | IPR006593 | - | |
| Gabi1893g00016 | 230 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Gabi1893g00016 | 230 | PANTHER | CYTOCHROME B561-RELATED | 4 | 218 | IPR043205 | GO:0016491 | |
| Gabi1893g00016 | 230 | FunFam | Cytochrome b reductase 1 | 5 | 225 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi1893g00016 | Gabi-Chr1893 | 177163 | 180916 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi1893g00016 | 1 | 219 | Chloroplast and Mitochondria Gene Families | AT4G25570 | 67.123 | 1.30e-103 | 299 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi1893g00016 | K08360 | - | qsa:O6P43_004312 | 345.895 |