Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1891g00015 ATGTCGTTACCGACTTGTTCGCCGGAGCAACTGGCTCAGTACTTGGGCCCGAACGCAACGAACGCCGTCGCCGCCGGAAAATTCATATGCGACCAATTCGCCGCCGTGAACAACAAATTCACCGACACGGCGTTCGCGGTGGACAACACCTACCTCCTCTTCTCAGCCTACCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGTTCCGTCCGCGCAAAGAACACCATGAACATCATGCTCACAAACGTCCTCGACGCCGCCGCCGGCGGCCTCTTCTACTACCTCTTCGGATTCGCCTTCGCCTTCGGAACACCGTCCAACGGCTTCATCGGAAAACACTTCTTCGGCCTCAAAAACGTCCCGTCGGTAACCGTCGACTACAGCTACTTCCTCTACCAATGGGCGTTCGCAATCGCCGCCGCCGGAATCACCAGCGGATCCATCGCCGAGAGAACACAGTTCGTCGCTTACCTCATCTACTCATCCTTCCTCACCGGATTCGTCTATCCGGTGGTGTCTCACTGGTTCTGGTCCGGCGACGGTTGGGCCAGCGCGACGAACACCGGAAACCTCCTCTTCAGCTCCGGCGTAATCGATTTCGCCGGCTCCGGCGTCGTTCACATGGTCGGCGGCGTGGCCGGGCTTTGGGGAGCCCTAATCGAAGGTCCTAGAATCGGAAGATTCGATCATAACGGTAAAGCCATCGCGCTTCGTGGCCATAGCGCTTCTTTGGTTGTGCTTGGAACCTTCATGCTTTGGTTCGGTTGGTACGGTTTTAACCCCGGTTCGTTCACCAAGATTCTAAACGCTTATGATTCTGGTAACTACTACGGTCAATGGAGTGCAGTGGGTAGGACAGCTGTCACAACCACATTGGCTGGCTCCACCGCAGCGCTAACAACCCTCTTTGGGAAAAGGGTACTTTCCGGTCATTGGAACGTAACTGACGTCTGTAACGGTTTGTTAGGCGGTTTCGCCGCAATAACCGCCGGGTGTTCAGTTGTTGAGCCATGGGCCGCCATCGTGTGTGGGTTTGTTGCGGCGGTTGTTTTGATTGGGTGTAACAAGTTAGCGGAGAAGGTTAAGTTTGACGATCCGTTAGAGGCGGCGCAGTTGCACGGAGGGTGCGGCGCGTGGGGTGTGATTTTCACGGGTTTGTTTGCTAAAGAGGAGTTTGTGAATCAGGTTTACCCGGGTAAACCGGGTCGGCCTTATGGGTTGTTTATGGGTGGTGGGGGGAAGTTGTTGGCGGCGCATGTGATTCAGATTTTGGTTATCACGGGTTGGGTTAGTGCTACCATGGGTCCTTTGTTTTTTGTTTTGAATAAATTGAAGCTGCTTCGGATCTCCACTGAGGATGAGCTTGCGGGTATGGATCTGACCCGACATGGTGGGTTTGCTTATGATTATGAGGATGAGTCGCATAAGAATGGGATTCAGTTGAGGAAGATTGAACCTAACTCTTCTTCCACTCCCACCGAATGA 1497 0.5431 MSLPTCSPEQLAQYLGPNATNAVAAGKFICDQFAAVNNKFTDTAFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGKHFFGLKNVPSVTVDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASATNTGNLLFSSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHNGKAIALRGHSASLVVLGTFMLWFGWYGFNPGSFTKILNAYDSGNYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRVLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIGCNKLAEKVKFDDPLEAAQLHGGCGAWGVIFTGLFAKEEFVNQVYPGKPGRPYGLFMGGGGKLLAAHVIQILVITGWVSATMGPLFFVLNKLKLLRISTEDELAGMDLTRHGGFAYDYEDESHKNGIQLRKIEPNSSSTPTE 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1891g00015 498 Gene3D Ammonium transporter AmtB like domains 28 492 IPR029020 -
Gabi1891g00015 498 NCBIfam ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gabi1891g00015 498 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gabi1891g00015 498 PANTHER AMMONIUM TRANSPORTER 32 468 - -
Gabi1891g00015 498 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gabi1891g00015 498 SUPERFAMILY Ammonium transporter 47 453 - -
Gabi1891g00015 498 FunFam Ammonium transporter 29 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1891g00015 Gabi-Chr1891 214086 216021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1891g00015 5 497 Inorganic Solute Cotransporters AT4G13510 81.275 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1891g00015 K03320 - qsa:O6P43_022085 858.211