Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1890g00012 | ATGTACCCACAGCAACAACACCATGTTCCCTACACCAACATACAGCAACCATACTATTCTGCAAACCCATTCTTGTTATCGTTCCCTTTCCCCTCCGATTCTGCTCTTCACCCTCCTGGCATCATCGACCCACTTGGAAATTCAACACCTTCTGCTGCTTATGGAGCCCAAACAACAGATTCTCAGAACTGGATCGTCAAACAAGCTGACCCCATCAGATATGATCTTGCTGTTGGTTCATCACATGAGACTTTGGCAGCATCAGCAAATTTGCTTTCCACATGGAATGACACATGGTCACATCAATATTTCACTAATAATATTGCAGGAATGTTACCTAACCAGACCAAAGACACGAAACCAATGAGATGTGAAGTTTGCAAAATTGATTGTAACAGCAAAGATGTTTATGATAAGCACATAATAGGGAAGAAACACCAGAGGAATTTGCAGGAACAGATTAATTCCACCAATACATTATTAGCAGGACCCTCTCATGTGAGTGTACAAAGTTACACAAGTAGTGTCCAAGCACAAGTGTTAACTGGTGCCGTAGGAAAGGACTTAGAGTCTAAGAAACGGAAGCTTTTGAATGGTGGTGCGCCCATTGATTCTGTAAAGGTTTGTACGGTATGCAACATTGTGTGCAATAGTCAAGAAGTATTTAACAAACATCTAGCAGGAAAAAAGCATGCTGCTCAGGTTGGCTTGATGTCTAATAATGGGATTGGTCCATATATTGCTGCATTTAAGCGACAAGGTATTGGTCCTTGGAAGAAAGCTCCAAAGAAAATCAAGGTTGCTCAATCAGCATGGTGTGAAGTTTGTAAGATTAATTGTAATAGCAGGGATGTGTATATTGTACACTTATCTGGGAAGAAACACCTGAAGAACTTGGAGAAACTATCAAAACCAAAAATTGATGCTGCTGCTGGTGCTGCTACCACCACAGCAAATGCTTTGCAACTTGCGGCGAATCCGGTAATCGGGCCACAGGAAAAGCCAGATTCTGATAAACTGAAATCACAGAAGGAACCAGAAATGGATATCGAGACAAAGAAGCGTAAAGTTGTAGAAGGGGGGGCTGCAGCAGGGGCTGTTAGATTTTGCACTCTATGCAATGTGGTATGTAACAGCGAAACGGTTTTTAATGCTCACCTTACTGGGCATAAACATGGTGCTATGGTGAAGAAGCAGACAGAGTCAAGAGGGGCAACTACTGGCTGA | 1227 | 0.4246 | MYPQQQHHVPYTNIQQPYYSANPFLLSFPFPSDSALHPPGIIDPLGNSTPSAAYGAQTTDSQNWIVKQADPIRYDLAVGSSHETLAASANLLSTWNDTWSHQYFTNNIAGMLPNQTKDTKPMRCEVCKIDCNSKDVYDKHIIGKKHQRNLQEQINSTNTLLAGPSHVSVQSYTSSVQAQVLTGAVGKDLESKKRKLLNGGAPIDSVKVCTVCNIVCNSQEVFNKHLAGKKHAAQVGLMSNNGIGPYIAAFKRQGIGPWKKAPKKIKVAQSAWCEVCKINCNSRDVYIVHLSGKKHLKNLEKLSKPKIDAAAGAATTTANALQLAANPVIGPQEKPDSDKLKSQKEPEMDIETKKRKVVEGGAAAGAVRFCTLCNVVCNSETVFNAHLTGHKHGAMVKKQTESRGATTG | 408 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1890g00012 | 408 | MobiDBLite | consensus disorder prediction | 328 | 350 | - | - | |
Gabi1890g00012 | 408 | SUPERFAMILY | beta-beta-alpha zinc fingers | 97 | 152 | IPR036236 | - | |
Gabi1890g00012 | 408 | SUPERFAMILY | beta-beta-alpha zinc fingers | 204 | 235 | IPR036236 | - | |
Gabi1890g00012 | 408 | SUPERFAMILY | beta-beta-alpha zinc fingers | 268 | 302 | IPR036236 | - | |
Gabi1890g00012 | 408 | SUPERFAMILY | beta-beta-alpha zinc fingers | 366 | 399 | IPR036236 | - | |
Gabi1890g00012 | 408 | Gene3D | Classic Zinc Finger | 259 | 302 | - | - | |
Gabi1890g00012 | 408 | Gene3D | Classic Zinc Finger | 111 | 153 | - | - | |
Gabi1890g00012 | 408 | Gene3D | Classic Zinc Finger | 186 | 237 | - | - | |
Gabi1890g00012 | 408 | Gene3D | Classic Zinc Finger | 337 | 400 | - | - | |
Gabi1890g00012 | 408 | PANTHER | ZINC FINGER PROTEIN 385B-LIKE | 116 | 237 | - | - | |
Gabi1890g00012 | 408 | SMART | c2h2final6 | 271 | 295 | IPR013087 | - | |
Gabi1890g00012 | 408 | SMART | c2h2final6 | 368 | 390 | IPR013087 | - | |
Gabi1890g00012 | 408 | SMART | c2h2final6 | 122 | 146 | IPR013087 | - | |
Gabi1890g00012 | 408 | SMART | c2h2final6 | 207 | 231 | IPR013087 | - | |
Gabi1890g00012 | 408 | Pfam | Zinc-finger of C2H2 type | 272 | 295 | - | - | |
Gabi1890g00012 | 408 | Pfam | Zinc-finger of C2H2 type | 124 | 146 | - | - | |
Gabi1890g00012 | 408 | Pfam | Zinc-finger of C2H2 type | 369 | 392 | - | - | |
Gabi1890g00012 | 408 | Pfam | Zinc-finger of C2H2 type | 208 | 231 | - | - | |
Gabi1890g00012 | 408 | MobiDBLite | consensus disorder prediction | 334 | 350 | - | - | |
Gabi1890g00012 | 408 | SMART | ZnF_U1_5 | 365 | 399 | IPR003604 | GO:0003676|GO:0008270 | |
Gabi1890g00012 | 408 | SMART | ZnF_U1_5 | 119 | 153 | IPR003604 | GO:0003676|GO:0008270 | |
Gabi1890g00012 | 408 | SMART | ZnF_U1_5 | 204 | 238 | IPR003604 | GO:0003676|GO:0008270 | |
Gabi1890g00012 | 408 | SMART | ZnF_U1_5 | 268 | 302 | IPR003604 | GO:0003676|GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1890g00012 | Gabi-Chr1890 | 136996 | 141380 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1890g00012 | 189 | 396 | C2H2 Transcription Factor Family | AT5G61190 | 29.048 | 3.24e-20 | 91.3 |