Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1884g00031 ATGTCCGACGGATCTCCTCCTCCGGTTACCGGCGAACGATCCTCGCCGTCGCCGGAACATAATTCCCGAAACCACGTCTCCGATTCCCAGAACCACCACGCCCCCACTCCCAAGGAGGAAACCGCCGTCGCTCCTCCTCCCCCAACCACCAGGAGCAACCGCCCCTCCCGCGCGTGCACCATTCGTGCCGCGTCTCGCCTCTATTCCACGTCGCAGCAGCAACCGCCGGCGGTTGAACGGAAGCTGAAAGCCTCGAAGAAGGAGCAGCGGCGGGAGGATTCGCCGCCGCAGCCGTCGCAATGCAGCAAGATCGTTACGCCGTTGGTGGAACCTCCCTCGCCGTCGCAGTCGCCGCGGTGGGACCTGCGGTCCATGTGGGAGTTAGCTTCCATACTCAATTTCTTGCATCTATTTAGGCCTCTTTTGAATATCTCACTAGAATTCTCTGCTGAAGAGTTCGAGACAGCTCTTCTTGTCCCCAACGACACTTTGAGTGATATACATATGCCTTTGCTAAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGTGATACTTGGATAACCGTACTATGCCGGAAATTGAGAGATTGGTGGCATTGGGTTGCAGATGGGGATCTTCCAATTGTTGCATCACATGGGGCGGAGATTGAAGTATATAAATCACTTCATCCCGGGGTCCGAGTTGTCATCTTAAAAGCACTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTATATTGACAACTCAATCAAACATGGTGTTCAGCTTTCAACATTCCGTAAAGAGCGTATTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTGTATCGAGAAATAAGGAAAACTGAAGTGGTTCAAATAAAAAAGGGAAAAGCAAGGGGTTCCCAGGTTCTTTCTAATACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAATAGAACAGAGGTTTCTGTGGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCATAAGAAAAAGGAGAGGTTGCTGAAAAAGCAACACAGACAAGCTCTTCTTCTTGATAATTACTTGGTTGTTGATGGGCTTGCTCCCGGGCGTTCGCTTCGTGATAGGAAACCCGTTACCTACACTTTCGATGATTACGATCGGTCCATCAATGAGGCAATTAAAGTAACCAAGCGGAAACAGCCATCCCCAGAACCTCTGCCCAGGAGAGAATCAGTACCAAAACCTGAAGCTTTGACTAATGGTAAATATGGTCCTTCACATGCCCCACAACATCTGAATTTTGGTATGTCATCTCCAGAATCATCTTACTCTGATGACGATGAGGAAGAGTATAAAACTGACACATTGGATAGAAGCAATCGGCGAAGACAGAAACCTAAGCGGTATTCAGAGAAAGAGTTCGTCGACGCAGTATCAGATAATGAGGCAGACTTTGACAGTGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCAAGAAACGCAAGCAGAGAAGGAAGCTATCTAGTAGCTCTGAAGGAGATGAAGAATATCAGTGGAATGAAGATAACGTTGAAGATGAAGAAGAAGAAGAAGACGATGAAGATTCCTTGAGCATGAGTGAGGATAGTGACAAACCCCGTAAAGTCAAACAATTGCCAGGCCGTACTAGGAGGGAAACTAAACGCAAGTCTGTGGATGAGATTCAATCAGGTCTAAGACGCAGTAAGAGGGCAACTAGAAATCAAATAAATTACCGTAACTATGAGGTGTCGGAATCAGAAACAGAGTTTATTGAACCTGAGAAATCTAATGCATCAGCTGATCACTCAGATCCCAGTGAGAATGGGGAATATATGATGGAAAGTGAAGATTCAGATGGAAATGATGATGAAGATCAGGAAATGAAAGTAGATGAGCCTATTACTTATCCTGCAGAGGAAGAGAACCAAAAAAACCAGCCTCCTGAACAATCAAGTAGTCCTGGTCAGGAAGAAGTTGAGGGCACGGGAAAAAGACGTTTTCTTGATTTGAATGAGCTTGCCCCTAGCTCTGGTTTTGATGATGGTCCAAGTACGATAATGAAAGATGAAGACAATGATTACTGA 2187 0.454 MSDGSPPPVTGERSSPSPEHNSRNHVSDSQNHHAPTPKEETAVAPPPPTTRSNRPSRACTIRAASRLYSTSQQQPPAVERKLKASKKEQRREDSPPQPSQCSKIVTPLVEPPSPSQSPRWDLRSMWELASILNFLHLFRPLLNISLEFSAEEFETALLVPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLHPGVRVVILKALCDIRVEQEDIRSYIDNSIKHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYREIRKTEVVQIKKGKARGSQVLSNTSYQWEAVATNFDEFQDVSEKLFSSKNRTEVSVGKKLKIDMLPEIEKVHKKKERLLKKQHRQALLLDNYLVVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKVTKRKQPSPEPLPRRESVPKPEALTNGKYGPSHAPQHLNFGMSSPESSYSDDDEEEYKTDTLDRSNRRRQKPKRYSEKEFVDAVSDNEADFDSDDDIVGEAVYDEEYLKKRKQRRKLSSSSEGDEEYQWNEDNVEDEEEEEDDEDSLSMSEDSDKPRKVKQLPGRTRRETKRKSVDEIQSGLRRSKRATRNQINYRNYEVSESETEFIEPEKSNASADHSDPSENGEYMMESEDSDGNDDEDQEMKVDEPITYPAEEENQKNQPPEQSSSPGQEEVEGTGKRRFLDLNELAPSSGFDDGPSTIMKDEDNDY 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 673 692 - -
Gabi1884g00031 728 PANTHER REMODELING AND SPACING FACTOR 1 50 720 IPR028938 GO:0006355|GO:0031213
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 95 110 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 1 118 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 644 663 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 619 635 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 476 502 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 417 434 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 1 31 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 602 618 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 53 78 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 417 728 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 519 539 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 585 601 - -
Gabi1884g00031 728 Pfam DDT domain 130 175 IPR018501 -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 542 566 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 503 518 - -
Gabi1884g00031 728 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1884g00031 Gabi-Chr1884 172974 185049 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gabi1884g00031 DDT 5.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1884g00031 - - gmx:100795519 1103.2