Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1884g00030 ATGTCCGACGGATCTCCTCCTCCGGTTACCGGCGAACGATCCTCGCCGTCGCCGGAACATAATTCCCGAAACCACGTCTCCGATTCCCAGAACCACCACGCCCCCACTCCCAAGGAGGAAACCGCCGTCGCTCCTCCTCCCCCAACCACCAGGAGCAACCGCCCCTCCCGCGCGTGCACCATTCGTGCCGCGTCTCGCCTCTATTCCACGTCGCAGCAGCAACCGCCGGCGGTTGAACGGAAGCTGAAAGCCTCGAAGAAGGAGCAGCGGCGGGAGGATTCGCCGCCGCAGCCGTCGCAATGCAGCAAGATCGTTACGCCGTTGGTGGAACCTCCCTCGCCGTCGCAGTCGCCGCGGTGGGACCTGCGGTCCATGTGGGAGTTAGCTTCCATACTCAATTTCTTGCATCTATTTAGGCCTCTTTTGAATATCTCACTAGAATTCTCTGCTGAAGAGTTCGAGACAGCTCTTCTTGTCCCCAACGACACTTTGAGTGATATACATATGCCTTTGCTAAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGTGATACTTGGATAACCGTACTATGCCGGAAATTGAGAGATTGGTGGCATTGGGTTGCAGATGGGGATCTTCCAATTGTTGCATCACATGGGGCGGAGATTGAAGTATATAAATCACTTCATCCCGGGGTCCGAGTTGTCATCTTAAAAGCACTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTATATTGACAACTCAATCAAACATGGTGTTCAGCTTTCAACATTCCGTAAAGAGCGTATTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTGTATCGAGAAATAAGGAAAACTGAAGTGGTTCAAATAAAAAAGGGAAAAGCAAGGGGTTCCCAGGTTCTTTCTAATACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAATAGAACAGAGGTTTCTGTGGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCATAAGAAAAAGGAGAGGTTGCTGAAAAAGCAACACAGACAAGCTCTTCTTCTTGATAATTACTTGGTTGTTGATGGGCTTGCTCCCGGGCGTTCGCTTCGTGATAGGAAACCCGTTACCTACACTTTCGATGATTACGATCGGTCCATCAATGAGGCAATTAAAGTAACCAAGCGGAAACAGCCATCCCCAGAACCTCTGCCCAGGAGAGAATCAGTACCAAAACCTGAAGCTTTGACTAATGGTAAATATGGTCCTTCACATGCCCCACAACATCTGAATTTTGGTATGTCATCTCCAGAATCATCTTACTCTGATGACGATGAGGAAGAGTATAAAACTGACACATTGGATAGAAGGTGTGACATCAGCAATCGGCGAAGACAGAAACCTAAGCGGTATTCAGAGAAAGAGTTCGTCGACGCAGTATCAGATAATGAGGCAGACTTTGACAGTGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCAAGAAACGCAAGCAGAGAAGGAAGCTATCTAGTAGCTCTGAAGGAGATGAAGAATATCAGTGGAATGAAGATAACGTTGAAGATGAAGAAGAAGAAGAAGACGATGAAGATTCCTTGAGCATGAGTGAGGATAGTGACAAACCCCGTAAAGTCAAACAATTGCCAGGCCGTACTAGGAGGGAAACTAAACGCAAGTCTGTGGATGAGATTCAATCAGGTCTAAGACGCAGTAAGAGGGCAACTAGAAATCAAATAAATTACCGTAACTATGAGGTGTCGGAATCAGAAACAGAGTTTATTGAACCTGAGAAATCTAATGCATCAGCTGATCACTCAGATCCCAGTGAGAATGGGGAATATATGATGGAAAGTGAAGATTCAGATGGAAATGATGATGAAGATCAGGAAATGAAAGTAGATGAGCCTATTACTTATCCTGCAGAGGAAGAGAACCAAAAAAACCAGCCTCCTGAACAATCAAGTAGTCCTGGTCAGGAAGAAGTTGAGGGCACGGGAAAAAGACGTTTTCTTGATTTGAATGAGCTTGCCCCTAGCTCTGGTTTTGATGATGGTCCAAGTACGATAATGAAAGATGAAGACAATGATTACTGA 2199 0.4543 MSDGSPPPVTGERSSPSPEHNSRNHVSDSQNHHAPTPKEETAVAPPPPTTRSNRPSRACTIRAASRLYSTSQQQPPAVERKLKASKKEQRREDSPPQPSQCSKIVTPLVEPPSPSQSPRWDLRSMWELASILNFLHLFRPLLNISLEFSAEEFETALLVPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLHPGVRVVILKALCDIRVEQEDIRSYIDNSIKHGVQLSTFRKERIGGDSHGISYWYEDDPIIGHRLYREIRKTEVVQIKKGKARGSQVLSNTSYQWEAVATNFDEFQDVSEKLFSSKNRTEVSVGKKLKIDMLPEIEKVHKKKERLLKKQHRQALLLDNYLVVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKVTKRKQPSPEPLPRRESVPKPEALTNGKYGPSHAPQHLNFGMSSPESSYSDDDEEEYKTDTLDRRCDISNRRRQKPKRYSEKEFVDAVSDNEADFDSDDDIVGEAVYDEEYLKKRKQRRKLSSSSEGDEEYQWNEDNVEDEEEEEDDEDSLSMSEDSDKPRKVKQLPGRTRRETKRKSVDEIQSGLRRSKRATRNQINYRNYEVSESETEFIEPEKSNASADHSDPSENGEYMMESEDSDGNDDEDQEMKVDEPITYPAEEENQKNQPPEQSSSPGQEEVEGTGKRRFLDLNELAPSSGFDDGPSTIMKDEDNDY 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 677 696 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 95 110 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 475 506 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 1 118 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 648 667 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 623 639 - -
Gabi1884g00030 732 PANTHER REMODELING AND SPACING FACTOR 1 50 724 IPR028938 GO:0006355|GO:0031213
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 417 732 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 417 434 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 1 31 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 606 622 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 53 78 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 523 543 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 589 605 - -
Gabi1884g00030 732 Pfam DDT domain 130 175 IPR018501 -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 507 522 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 546 570 - -
Gabi1884g00030 732 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1884g00030 Gabi-Chr1884 172972 185049 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gabi1884g00030 DDT 5.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1884g00030 - - gmx:100795519 1097.42