Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1884g00016 | ATGGGACACAAAAAGCGAAACCATGCTCCGCGCTCGAAACAATCGCCGGCGGCTTCTCTGGTGGCGCAATCGGCCAACGGCGGAGCCGCCAATGGTTCCATTTCACCCGACCATGACTCCTGCAGCGTTTCTGAAAATAATATTGATAACCCTAGCAAGATCGAATTGGCTCCTCAATTTGAGGGTTCCGATTACGATTACTCCACAATCAAACTCGAATGCGAGCGAGCCCTCACTGCGTTTCGGCGCGGTAACCACAACAGGGCACTGAAGCTCATGAAGGAGTTGTGCTCGAAAGACGAGGACTCGGCTTACTTGGCGTTCGCTCACCGAGTTCAGGGCTTTGTGTTTATCAAAGTGGCGTCCATTCTCAATGACCCGAGCGCGAAGCAACGGCATTTGAAGAATGCCATTGAATCCGCGCGGAGAGCAGCTGAGCTGGCGCCCAATTCAGTTGAGTATGCGCATTTTTATGCCAATTTGATGTTGGAGGTAGCAACTGAAGGCAAGGAATATGAGGAGGTGGTGCATGAGTGTGAGAGGGCGCTTGCGGTTGAAAACCCCAATGATCCTGCGAAGGAGACCTTGCAGGATGAGAGCGAGCAGAAGATATCAACTGTGGAAGACCGGATAGCACATGTACAGAATGAATTGAGGCAGCTAATTCAGAAGTCAAACATAGCTTCATTGTCCACTTGGATGAAAAATCTGAGTAATGGAGAGGAGAGATTTCGGTTGATTCCGATAAGGAGGACCGCGGAGGACCCAATGGAGGTGAGGTTGGTTCAAACTAGAAGGCCTAATGAGATCAAGAAGGTGACCAAAACACCCGAGGAAAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGCTGTTGCAGCAAAAGCCAGAGTCTCCCCAATCTCCGAACGAAGGAGATAGGGATGATAGAGCACCAGATTCATCTTCAGGATTTAGTCAGAGGGTGGGTGATAGGCGAAAGCATGGAAATATGAGAAAGAATGGTTCTACAGATGAAAGGAAGAACTGGGTGCTCTCATATTGGAATTCAGTGAGTGTGGATATGAAGAAGGACTTGCTTAAGATTAAAATTTGTGATCTCAAGTCCCACTTTGGGTCTTCGAAGGATCCTTTGCCGAAAGATATTTTGTCAGAAGCTTTGTCATATGCTGGGCCCAATAAAACTTGGAAGTTCTGGCTTTGCTGCCATTGTGATGAGAAATATTGTAATTCAGAATCTCACAGGCAGCATGTTGTGCAGGAACACATGGGGAATCTCGTGCCAAAATTGCGGAGACTTTTGCCCCAAAATGTTGACAATGAATGGATTGAGATGATTCTTAATTGTTCTTGGAGGCCTGTGGATGTCTCAGCTGCGATTAAAATGCTTGATAATAAAGCGAAATTCAATGGTTCTTCGTTTCTTGAGGATTCGTACTTGGGTCATCATACTCAGGACTACAATGATTGTTTTAAAGATGCAAGCGGCTCTTACCATGAGAAGGAAAATGTAGGGTACAATCATTGCAATTGTACAACAGAAAGTAGTAACTGTCGTAAAATATCAGAAAGTGATATCAAAGAAGGTGCTGAAGACCGACAGTGTACGGCTAATCTTACTGCTGATTGTTGGCCTGTTTCTGATGATTCTGAGCGTGCAAAACTTCTGGAGAAAATTCATGCAGTATTCATGATGCTTATTAGACACAAATGTCTTGCTGCGAGTCATCTTAACAAGGTCATACAATTTACTATGGGAGAGATACAAGGTCTTGCTGTTGGTTCTCAACTTCTAAACCATGGTGTAGACCAAACACCAATGTGCATATGCTTTCTGGGAGCTTCACAGCTTAAGAAAATTCTCCAATTTCTCCAGGAAATATCTCATGCTTGTGGGTTGGGTAGGTATGCTGATGAAAGTAGTAGTCCCATGAATGATTTGCACAATATCAGTCAAGGTCCTGAGATCAAAGAGAAGATTGTTCTCGATGGAGATGCATCATGCATTCTTCTGGATGAGGGTTTACTGCCAACACAAGCTCAGGGGGCTATCTTGGATGATGTGACCACCCCAAGTTCTCCTGATGGAATTTCACAGTGTAATGATGCTTTGCTATGCTGGATATTTTCAAGTTCACCTATTGGGGATCAATTGACATCATGGATGAGGACCAGAGAAGATAAAAAACATCAAGGAATGGATATTGTCCAGATGCTCGAGAAGGAGTTTTATCACCTACAAAGCTTATGTGAGAAGAAGTGTGATCGCATAAGTTATGAGGAAGCACTGCAGACAGTAGAGGATCTTTGCCTTGAAGAAGGTAAGAAGAGGGAAAATGTTGGTGACTTTGTCCAGCAAAGCTATGAGTCTGTTTTAAAAAAGCGGAGAGAAGAGCTCGTTGAGAGTGAGAATGATGTGATGTATGTCAGCAATAGGTTTGAATTGGATGCTATATCAAATGTTTTGCAAGAAGCAGAAGCAATGAATGTTAATAAATTTGGCTATGAGGAAACTTATGCTGGTGTGACTTCTCAGTTATGTGACTTGGAATCGGGTGAGGAAGATGAATGGAGAATGAAGGACTTCTTGCATCAAATGGATAGTTGTATAGAAATTGCTATTCAGAAACTAAAAGAGCACTTATCTATAGAGCTTAGCAAAATTGATGCACGAATCATTAGAAATGTTACAGAGATGCAACAATTGGAACTCAAGCTTGGGCCTGTTTCTGCTTATGATTATCGAGCAATTTTAGTGCCTTTAGTGAAGTCGTACCTAAGGGCACTTTTGGAAGGTTTGGCTGAGAAAGATGCAAGAGAGAAGTCTGATGCTGCAAGCGAAGCATTTTTGGCTGAACTTGCTCTTGATTCCAGAAAGGCTGTTAAAGGGGGAAATGAGAACACGAGACATCTGGAGAAGACAAAAGATAAGAAGAAGAATAGAGATCATAGAAAAACAAGAGATTCCAAGGCCACAAGCAGTCATGTGCAGCTCTTGCTTCGTTCTACAACACCTGATTCCAGTCTAGTTGCACCTGATAGTGATCATGAGGTTGTTTCTGTTAATGGTGATGACTTGGAACAACATGAAGAGGAATTTAGGCGCAAAACTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAATTTCAACGAAGGATTGAAAATGAAGCAAAACAGAAGCATCTTGCTGAGCAACAAAAGAAATCATCTGGGACATATTTAGAGGAAATGCCGGACAAGCTTCATGATTATCAATTGAAGGCGATTGCTGATTGTCTGGATGCGCACAAACATGAGCAGTTGGCAAAGGAGAATGGGTGCCCAAGCAATCTGGATGGTGTGCTTGTCACCACAGCGAATGGTTCCATGGTGCCAACTAAATCTTTAGCTGATTCAGCTACCCAAAAGATTAATTATTTGCATCAGTCAAAAGTTAAACAAGATTTGCCTAATGGAGTTGGTCTGGAGAATGGTCTTCCTTTGCCTGATCGGCGTGCAGGAAAAAAGCACAAACGGCATAGGAATTCTTCCAAAATGGTTGATGGAAAGTTTGAATCTGTCTCATTTGAAAAGGAGAATATTGAGGATATGCATACTGAATGTAACGTGAGAGAGCAGGCTAAATTCAATAACAATCAAGATGCTAACAATGTGTGGGAGAACAATGGATCAAAGGTAATGAAAGAGTTGCAAGTGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAATGGCTGTACGCCAAAGCCTGGACACATATCAAGCACGTGGGAATTTGCATTCGGTTTCCGGTTTAAGAGCGTCTCACAGAGCTTCTTCACAAGTAGATTGTTTGGATTGTCCACCTGTGGAAGAATCAAGTGAGGATGTCAATGGAGCTACTTTACTTGGTACTGGACTGAAGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTACGACGCTTTCGGGTGGGATTTCTTGGCAGATCAAAATCAGAGCATGATCATGTAGGTAATCCTTGTGTTGTCTGTGCATTGTATGAAATTTTCACTGCGCTGGACCTTGCACCAAAGGATTCAACAAGAGAAGCAGTTGCACCTACTTCCCTGCGGATAGCTCTAAGCAACCTATATCCTCATAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAGGTACTGGCAGTAATATTTGACTGCCTACATCAATCATTTACTCGTGGTTCAAGTGTTTCTGATTCAGAATCAGTGGAAAGCAATTGCATGGGATCTTGGGATTGTGCAAACAGTAGTTGTATAGCACATTCACTTTTTGGAATGGACATTTTTGAACAAATGAACTGCTATCACTGTGGTCGGGAGTCCCGACATTTGAAGTATACTTCCTTCTTTCACAATATAAATGCCAATTCCCTCCGGACAATGAAGGTTATGTTTGCTCAAAGCTCCTTTGATAAGCTTTTGAATCTCGTGGAGATGAACCATCAGTTGGCTTGTGATCTAGAAGTTGGTGGCTGTGGCAAGCTCAATCACATACATCACTTTCTTTCAACTCCACCCCATGTTTTTATGACAGTTTTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACAGCAACTCTGGGCGCCCTGAGCACCAAGATAGATATCAGTGTCCTGTATCGGGGTTTAGATCCTAAAAGCACCCATAGCTTGGTTTCGGTGGTTTGCTACTATGGTCAGCATTATCATTGCTTTGCTTATAGTCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGATAATTGGTGGATGGGCGGATGTTCTCACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAATTAG | 4917 | 0.4269 | MGHKKRNHAPRSKQSPAASLVAQSANGGAANGSISPDHDSCSVSENNIDNPSKIELAPQFEGSDYDYSTIKLECERALTAFRRGNHNRALKLMKELCSKDEDSAYLAFAHRVQGFVFIKVASILNDPSAKQRHLKNAIESARRAAELAPNSVEYAHFYANLMLEVATEGKEYEEVVHECERALAVENPNDPAKETLQDESEQKISTVEDRIAHVQNELRQLIQKSNIASLSTWMKNLSNGEERFRLIPIRRTAEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKPESPQSPNEGDRDDRAPDSSSGFSQRVGDRRKHGNMRKNGSTDERKNWVLSYWNSVSVDMKKDLLKIKICDLKSHFGSSKDPLPKDILSEALSYAGPNKTWKFWLCCHCDEKYCNSESHRQHVVQEHMGNLVPKLRRLLPQNVDNEWIEMILNCSWRPVDVSAAIKMLDNKAKFNGSSFLEDSYLGHHTQDYNDCFKDASGSYHEKENVGYNHCNCTTESSNCRKISESDIKEGAEDRQCTANLTADCWPVSDDSERAKLLEKIHAVFMMLIRHKCLAASHLNKVIQFTMGEIQGLAVGSQLLNHGVDQTPMCICFLGASQLKKILQFLQEISHACGLGRYADESSSPMNDLHNISQGPEIKEKIVLDGDASCILLDEGLLPTQAQGAILDDVTTPSSPDGISQCNDALLCWIFSSSPIGDQLTSWMRTREDKKHQGMDIVQMLEKEFYHLQSLCEKKCDRISYEEALQTVEDLCLEEGKKRENVGDFVQQSYESVLKKRREELVESENDVMYVSNRFELDAISNVLQEAEAMNVNKFGYEETYAGVTSQLCDLESGEEDEWRMKDFLHQMDSCIEIAIQKLKEHLSIELSKIDARIIRNVTEMQQLELKLGPVSAYDYRAILVPLVKSYLRALLEGLAEKDAREKSDAASEAFLAELALDSRKAVKGGNENTRHLEKTKDKKKNRDHRKTRDSKATSSHVQLLLRSTTPDSSLVAPDSDHEVVSVNGDDLEQHEEEFRRKTELEEEEKKLEETLEFQRRIENEAKQKHLAEQQKKSSGTYLEEMPDKLHDYQLKAIADCLDAHKHEQLAKENGCPSNLDGVLVTTANGSMVPTKSLADSATQKINYLHQSKVKQDLPNGVGLENGLPLPDRRAGKKHKRHRNSSKMVDGKFESVSFEKENIEDMHTECNVREQAKFNNNQDANNVWENNGSKVMKELQVEDEEEERFQADLKMAVRQSLDTYQARGNLHSVSGLRASHRASSQVDCLDCPPVEESSEDVNGATLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFRVGFLGRSKSEHDHVGNPCVVCALYEIFTALDLAPKDSTREAVAPTSLRIALSNLYPHSNFFQEAQMNDASEVLAVIFDCLHQSFTRGSSVSDSESVESNCMGSWDCANSSCIAHSLFGMDIFEQMNCYHCGRESRHLKYTSFFHNINANSLRTMKVMFAQSSFDKLLNLVEMNHQLACDLEVGGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLGALSTKIDISVLYRGLDPKSTHSLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKIIGGWADVLTMCERGHLQPQVLFFEAVN | 1638 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1884g00016 | 1638 | Coils | Coil | 197 | 224 | - | - | |
Gabi1884g00016 | 1638 | ProSiteProfiles | Ubiquitin specific protease (USP) domain profile. | 1305 | 1637 | IPR028889 | - | |
Gabi1884g00016 | 1638 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Gabi1884g00016 | 1638 | MobiDBLite | consensus disorder prediction | 292 | 339 | - | - | |
Gabi1884g00016 | 1638 | MobiDBLite | consensus disorder prediction | 303 | 339 | - | - | |
Gabi1884g00016 | 1638 | CDD | Peptidase_C19 | 1396 | 1635 | - | - | |
Gabi1884g00016 | 1638 | MobiDBLite | consensus disorder prediction | 963 | 1044 | - | - | |
Gabi1884g00016 | 1638 | MobiDBLite | consensus disorder prediction | 12 | 47 | - | - | |
Gabi1884g00016 | 1638 | MobiDBLite | consensus disorder prediction | 1153 | 1182 | - | - | |
Gabi1884g00016 | 1638 | Gene3D | Tetratricopeptide repeat domain | 65 | 211 | IPR011990 | GO:0005515 | |
Gabi1884g00016 | 1638 | SUPERFAMILY | Cysteine proteinases | 1305 | 1635 | IPR038765 | - | |
Gabi1884g00016 | 1638 | PANTHER | UBIQUITIN SPECIFIC PROTEINASE | 1 | 1637 | - | - | |
Gabi1884g00016 | 1638 | Coils | Coil | 1028 | 1065 | - | - | |
Gabi1884g00016 | 1638 | Pfam | Protein of unknown function (DUF629) | 347 | 874 | IPR006865 | - | |
Gabi1884g00016 | 1638 | Gene3D | Cysteine proteinases | 1290 | 1636 | - | - | |
Gabi1884g00016 | 1638 | MobiDBLite | consensus disorder prediction | 1020 | 1044 | - | - | |
Gabi1884g00016 | 1638 | SUPERFAMILY | TPR-like | 68 | 191 | IPR011990 | GO:0005515 | |
Gabi1884g00016 | 1638 | MobiDBLite | consensus disorder prediction | 994 | 1012 | - | - | |
Gabi1884g00016 | 1638 | Pfam | Protein of unknown function (DUF627) | 76 | 187 | IPR006866 | - | |
Gabi1884g00016 | 1638 | Pfam | Ubiquitin carboxyl-terminal hydrolase | 1306 | 1613 | IPR001394 | GO:0004843|GO:0016579 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1884g00016 | Gabi-Chr1884 | 106392 | 116803 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1884g00016 | 66 | 1635 | C2H2 Transcription Factor Family | AT3G47890 | 56.258 | 0.0 | 1724 |