Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1881g00007 ATGAGAAACCAACGGCCTCTCCATCTCTTACTATCCCTCGTCTTCTTGGCAGCTGCATTCTCAGCCGCCACCGTCGTAGAAAATCGTGGAACCACCAGCGGTGACAGTAACACCGATTTCATCCGGACGAGTTGCAACACCACGCTCTACCCGAAAGTCTGCTACAGTTCCCTCTCTCGGCACGCTAATGCTGTCCAACAAAACCCTGGCCAGCTGGCTGGCGTCGCCATAGCCGTTAGCCTCTTGAAGGTCCAAAGTGCGGCCTCCTACCTCTCCAACCTCACGCGTGAAGCCGACAACTCGCCTGCTGCCAAGGCGGTCCATGACTGCTTCTCGAAATTAGACGACGCCGTCGACCAAATCCGCGACTCACTGGAGCAGATGCGGCAGATAGGATCCTCCGGCGCCGGAGACGGCACCGGCTCGTTCCGATTCCAGATGAGCAACGTGATGACGTGGATGAGCGCGGCGCTCACCAACGAAGGGACGTGTATGGAAGGATTCAACGACGTATCGGAGGGTTCGGTGAAGACGGATGTATCCCGTCGGGTCACGAAGGTGAAGAAGATAACAAGCAACGCTTTGGCGCTTGTGAATAGCTATAACAACAAGGGAATGCCTTAA 624 0.5593 MRNQRPLHLLLSLVFLAAAFSAATVVENRGTTSGDSNTDFIRTSCNTTLYPKVCYSSLSRHANAVQQNPGQLAGVAIAVSLLKVQSAASYLSNLTREADNSPAAKAVHDCFSKLDDAVDQIRDSLEQMRQIGSSGAGDGTGSFRFQMSNVMTWMSAALTNEGTCMEGFNDVSEGSVKTDVSRRVTKVKKITSNALALVNSYNNKGMP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1881g00007 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 201 IPR035513 -
Gabi1881g00007 207 FunFam Pectin methylesterase inhibitor 1 36 201 - -
Gabi1881g00007 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 197 - -
Gabi1881g00007 207 SMART PMEI_2 36 197 IPR006501 GO:0004857
Gabi1881g00007 207 Pfam Plant invertase/pectin methylesterase inhibitor 39 197 IPR006501 GO:0004857
Gabi1881g00007 207 CDD PMEI-like_3 43 201 - -
Gabi1881g00007 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 200 IPR035513 -
Gabi1881g00007 207 NCBIfam pectinesterase inhibitor domain 12 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1881g00007 Gabi-Chr1881 167277 167900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1881g00007 38 197 Carbohydrate Esterase AT5G53370 29.448 5.16e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1881g00007 - - gmx:100812251 245.743