Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi1881g00006 | ATGAGAAACCAACGGCCTCTCCATCTCTTACTATCCCTCGTCTTCTTGGCAGCTGCATTCTCTGCCGCCACCGCCGTAGAAAATGGCGGAACCACCAGCAGTGACAGTAACAACGATTTCATCCGGACGAGTTGCAACACCACGCTCTACCCGAAAGTCTGCTACAGTTCCCTCTCTCGGCACGCTAATGTTGTCCAACAAAACCCTGGCCAGCTGGCTCGCGTCGCCATAGCCGTTAGCCTCTTGAAGGTCCAAAGTGCGGCCTCCTACCTCTCCAACCTCACGCGCGAAGCCAACAACTCGCCTACTGCCAAGGCGGTCCATGACTGCTTCTCGAAATTAGACGACGCCGTCGACCAAATCCACGACTCACTGGAGCAGATGCGGCAGATAGGATCCTCCGGCGCCGGAGACGGCACCGGCTCGTTCCGATTCCAGATGAGCAACGTGCTAACGTGGATGAGTGCGGCGCTCACCAACGAGGGGACGTGTATGGAAGGATTCAACGATGTATCGGAGGGTCTGGTGAAGACGGATGTATCCCGTCGGGTCACGAAGGTGAAGAAGATAACAAGCAATGCTTTGGCGCTTGTGAATAGCTATAGCAACAAGGGAATGCCTTGA | 624 | 0.5545 | MRNQRPLHLLLSLVFLAAAFSAATAVENGGTTSSDSNNDFIRTSCNTTLYPKVCYSSLSRHANVVQQNPGQLARVAIAVSLLKVQSAASYLSNLTREANNSPTAKAVHDCFSKLDDAVDQIHDSLEQMRQIGSSGAGDGTGSFRFQMSNVLTWMSAALTNEGTCMEGFNDVSEGLVKTDVSRRVTKVKKITSNALALVNSYSNKGMP | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi1881g00006 | 207 | SMART | PMEI_2 | 36 | 197 | IPR006501 | GO:0004857 | |
| Gabi1881g00006 | 207 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 35 | 201 | IPR035513 | - | |
| Gabi1881g00006 | 207 | Pfam | Plant invertase/pectin methylesterase inhibitor | 39 | 197 | IPR006501 | GO:0004857 | |
| Gabi1881g00006 | 207 | NCBIfam | pectinesterase inhibitor domain | 9 | 201 | IPR006501 | GO:0004857 | |
| Gabi1881g00006 | 207 | CDD | PMEI-like_3 | 43 | 203 | - | - | |
| Gabi1881g00006 | 207 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 9 | 197 | - | - | |
| Gabi1881g00006 | 207 | FunFam | Pectin methylesterase inhibitor 1 | 36 | 201 | - | - | |
| Gabi1881g00006 | 207 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 38 | 202 | IPR035513 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi1881g00006 | Gabi-Chr1881 | 155876 | 156499 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi1881g00006 | 19 | 203 | Carbohydrate Esterase | AT3G14310 | 23.936 | 3.72e-15 | 71.6 |