Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi1881g00005 | ATGAGAACCCAACGGCCTCTCCATCTCCTACTATCCCTTGTCTTCTTGGCAGCCGCATTCTCAGTAGCCACCGCCATAGAAAACGGCGGAACCACCAGCAGTGACGGCAACACCGATTTCATCCGGACGAGTTGCAACACCACGCTCTACCCGAAAGTCTGCTACAGTTCCCTCTCTCGGCACGCTAATGCTGTCCAACAAAACCCTGGCCAGCTGGCTCGCGTCGCCATAGCCGTTAGCCTCTTAAAGGTCCAAAGTGCGGCCTCCTACCTCTCCAACCTCACGCGCGAAGCTGACAACTCGCCTGCTGCCAAGGCGGTCCATGACTGCTTCTCGAAATTAGGCGACACCGTCGACCAAATCCGCGACTCACTGGAGCAGATGCGGCAGATAGGATCCTCCGGCGCCAGAGACGGCTCCGGCTCGTTCCAATTCCAGATGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTCACCAACGAGGGGACGTGTATGGAAGGATTCAACGACGTATCGGAGGGTCCGGTGAAAACGGATGTATCCCGTCGGGTCACGAAGGTGAAGAAGATAACAAGCAATGCTTTGGCGCTTGCGAATAGCTATAGCAACAAGGGAATGCCTTGA | 624 | 0.5657 | MRTQRPLHLLLSLVFLAAAFSVATAIENGGTTSSDGNTDFIRTSCNTTLYPKVCYSSLSRHANAVQQNPGQLARVAIAVSLLKVQSAASYLSNLTREADNSPAAKAVHDCFSKLGDTVDQIRDSLEQMRQIGSSGARDGSGSFQFQMSNVLTWMSAALTNEGTCMEGFNDVSEGPVKTDVSRRVTKVKKITSNALALANSYSNKGMP | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi1881g00005 | 207 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 36 | 201 | IPR035513 | - | |
| Gabi1881g00005 | 207 | SMART | PMEI_2 | 36 | 197 | IPR006501 | GO:0004857 | |
| Gabi1881g00005 | 207 | NCBIfam | pectinesterase inhibitor domain | 13 | 201 | IPR006501 | GO:0004857 | |
| Gabi1881g00005 | 207 | FunFam | Pectin methylesterase inhibitor 1 | 36 | 201 | - | - | |
| Gabi1881g00005 | 207 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 39 | 201 | IPR035513 | - | |
| Gabi1881g00005 | 207 | Pfam | Plant invertase/pectin methylesterase inhibitor | 39 | 197 | IPR006501 | GO:0004857 | |
| Gabi1881g00005 | 207 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 9 | 198 | - | - | |
| Gabi1881g00005 | 207 | CDD | PMEI-like_3 | 43 | 203 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi1881g00005 | Gabi-Chr1881 | 151349 | 151972 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi1881g00005 | 7 | 197 | Carbohydrate Esterase | AT5G53370 | 26.020 | 1.28e-13 | 67.0 |