Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi1881g00001 | ATGAGAACCCAACGGCCTCTCCATCTCCTACTATCCCTCGTCTTCCTGGCAGCCACATTCTCAGCGGCCACCGCCGTAGAAAACAGAGGAACCACCGGAAGTGACGGCAACACTGATTTCATCCGGACGAGTTGCAACACCACGCTCTACCCGAAAGTCTGCTACAGTTCCCTCTCTCGGCACGCCAATGCTGTCCAACAAGACCCTGGCCAGTTGGCTCGCGTCGCCATAGCCGTTAGCCTCTTGAAGGTCCAAAGCGCGGCCTCCTACCTCTCCAACCTCACGCGCGAAGCCGACAACTCGCCTGCTGCCAAGGAGGTCCATGACTGCTTCTCGAAATTAGACGACGCCGTCGACCAAATCCGCGACTCACTAGAGCAGATGCGGCAGATAGGATCCTCCGGGGCCGGAGACGGCACTGGCTCGTTCCGATTCCAGATGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTCACCAACGAGGGGACGTGTATGGAAGGATTCAACGACGTATCGGAGGGTCCGGTGAAGACGGATGTATCCCGTCGGGTGACGAAGGTGAAGAAGATAACAAGCAATGCTTTGGCGCTTGCGAATAGCTATAGCAACAAGGGAATGCCTTGA | 624 | 0.5737 | MRTQRPLHLLLSLVFLAATFSAATAVENRGTTGSDGNTDFIRTSCNTTLYPKVCYSSLSRHANAVQQDPGQLARVAIAVSLLKVQSAASYLSNLTREADNSPAAKEVHDCFSKLDDAVDQIRDSLEQMRQIGSSGAGDGTGSFRFQMSNVLTWMSAALTNEGTCMEGFNDVSEGPVKTDVSRRVTKVKKITSNALALANSYSNKGMP | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi1881g00001 | 207 | NCBIfam | pectinesterase inhibitor domain | 9 | 201 | IPR006501 | GO:0004857 | |
| Gabi1881g00001 | 207 | Pfam | Plant invertase/pectin methylesterase inhibitor | 39 | 197 | IPR006501 | GO:0004857 | |
| Gabi1881g00001 | 207 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 39 | 201 | IPR035513 | - | |
| Gabi1881g00001 | 207 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 36 | 201 | IPR035513 | - | |
| Gabi1881g00001 | 207 | CDD | PMEI-like_3 | 43 | 203 | - | - | |
| Gabi1881g00001 | 207 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 9 | 198 | - | - | |
| Gabi1881g00001 | 207 | SMART | PMEI_2 | 36 | 197 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi1881g00001 | Gabi-Chr1881 | 32297 | 32920 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi1881g00001 | 38 | 197 | Carbohydrate Esterase | AT5G53370 | 29.448 | 4.43e-15 | 71.2 |