Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi186g00008 ATGGAGAACTATCAGTACCCAGATTCCGGCGACTCATCGCCGCGGTCGAGGGAGATCGATTTCGAGAATCCGACGCCGTGGGAGGAGCAGCAGCAGAACTACAAGGCGAGGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCACGCACCCACGACAACCAGCTCTCGTACGTCGGCGGCGAAACCAAGATATTGGCGGTGGATCGCAACATCAAGTTCCCGACGTTCCTCTCGAAGCTCTCCGCACTCTGCGACACGCCGCCACAAGAAGTTACCTTCAAGTACCAACTTCCCGGCGAGGACCTAGACGCTCTGATTTCCGTCTCCAACGACGACGACCTCGAACACATGATGCACGAGTACGATCGCCTCTATCGCCCACCCGCTAAACCCGTTAGGATGAGGCTTTTCCTTTTTACAGCTGTTAATACCGATTGTGATCGCAATTCGGGTCCTCTTCCTCTTCAACCCGACCCGGTTAAGCCTCAACCCAACGTCGACTTCCTCTTCGGCCTCGACAAGGCTGTTGCTCCTCCAACTCACCCTCCTTCCTTCGCCGCCGTTAAGTTCCATGATCCGGTGCCTGAGCCTGTCGCGCCGCCTCCTGAGTACCAATCTCGCGGTGGTGCTGCTGCGGATCGGGTTGTTGGATCGGATCCGAATGTGAACCCGTATCAGAGGCAGCAGCAGCTGCATCAGGAGTTGCAGCGCTTGCAAATATCTGAGAATGATCAAACGTTGTATCGTAGAAGAAGTGAAGACGGTTTCGCCGGAGGTTATGGCGGCGCCGGTGGTGGCGATTATTACTTGCAGAAGATGCAGGATAAAGCCCCGCAGTCCAATTCGCAGGCCAACGTGCCGCAACCCGCGGGTTACTGGCCGGAGAAGCAATTCTCCGGCGATGGTTTTCAGACGACGGTGACTACCGCTCCCGGAGGAGGGGACCAGCCGGTTTATATGATCCCGGCGACGGGGACTTTCTATCATGCGCCGATGGTGCGTCCACCAACGGCGCCGGTAAACCAAGGGTACTATACTGTGCAACGAATGGCTTCTGATGGTTACCGTGAACAGCCGGTGTACGGCGGCGTGCAGCAACAAAAAGCGGCGTTTTCGTCGGCGGGTCAGGCAAGCTTTTCACCGGCACAGCCGGTTAGACCTTCCGCGTATCAAGAAGGATACGGCGTCGTTAGGCCAGCTGGGGTTCCGGATAATACGGGTGGTGCTGCGTACGCGCAGGTGGCGTATGATAGTGCAAGTGGGAGACAAGTTTACTACACTGCGCAAGGAGGGATGGTCCACGCGCCTCCGTACCAAGGGGTTGCTCCGGCAGTCAGCGCAGATATGAGATCGGCTGGGGTTTCAATGGGTCAGGATGTTAAAGGGGTAAATAAGGTTTCCCAAGGCTCTGTGTGA 1416 0.5685 MENYQYPDSGDSSPRSREIDFENPTPWEEQQQNYKARFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRNIKFPTFLSKLSALCDTPPQEVTFKYQLPGEDLDALISVSNDDDLEHMMHEYDRLYRPPAKPVRMRLFLFTAVNTDCDRNSGPLPLQPDPVKPQPNVDFLFGLDKAVAPPTHPPSFAAVKFHDPVPEPVAPPPEYQSRGGAAADRVVGSDPNVNPYQRQQQLHQELQRLQISENDQTLYRRRSEDGFAGGYGGAGGGDYYLQKMQDKAPQSNSQANVPQPAGYWPEKQFSGDGFQTTVTTAPGGGDQPVYMIPATGTFYHAPMVRPPTAPVNQGYYTVQRMASDGYREQPVYGGVQQQKAAFSSAGQASFSPAQPVRPSAYQEGYGVVRPAGVPDNTGGAAYAQVAYDSASGRQVYYTAQGGMVHAPPYQGVAPAVSADMRSAGVSMGQDVKGVNKVSQGSV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi186g00008 471 Gene3D - 56 140 - -
Gabi186g00008 471 MobiDBLite consensus disorder prediction 275 304 - -
Gabi186g00008 471 CDD PB1_UP2 39 139 - -
Gabi186g00008 471 PANTHER OS05G0427100 PROTEIN-RELATED 5 350 - -
Gabi186g00008 471 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 55 141 - -
Gabi186g00008 471 SUPERFAMILY CAD & PB1 domains 51 145 - -
Gabi186g00008 471 MobiDBLite consensus disorder prediction 1 28 - -
Gabi186g00008 471 Pfam PB1 domain 51 139 IPR000270 GO:0005515
Gabi186g00008 471 SMART PB1_new 50 141 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi186g00008 Gabi-Chr186 100846 102426 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi186g00008 35 153 MAP Kinase Kinase Kinase AT3G46920 44.167 1.83e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi186g00008 - - adu:107480527 649.047